Gene Information

Name : CKR_0884 (CKR_0884)
Accession : YP_002471349.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 987594 - 988322 bp
Length : 729 bp
Strand : +
Note : homology (Evalue<1e-4) to COG1126 [E] ABC-type polar amino acid transport system, ATPase component

DNA sequence : 
ATGATAGAAGGAATAAACTTAACTAAAAGTTTTAATAATTTAACAGTTTTTAAGGATTTGAATATAAAGGTAAAAAAAGG
AGAAGTTCTGGTAGTGATAGGGGCATCAGGATCAGGTAAAAGTACTCTTTTAAGATGCTTGAATCACCTAGAGGATTTAG
ACAGTGGAACCATAATTATAGAAGGGGAAGAATTAAATCCAAAGGATAAAAAAATACTTAGAAAAATAACTACCAAGATG
GGCATGGTATTTCAAAGCTTTAATCTGTTTCCTCATATGACTGCTATTGAAAATGTTATGGAAGCACCTTTGATAGTTAA
AAAGGAAAAGAAAGCAGTGGTACTTGAAAGAGCCAAAAAACTTTTAAATAAAGTTGGACTTGGAGATAAAATGGATTATT
ATCCATCTAAACTTTCAGGAGGACAGCAGCAAAGAGTTGCTATAGCAAGGGCTCTTGCTATGAATCCAGATATAATGTTG
TTTGACGAGCCTACATCAGCACTTGATCCGGAACTTGTTGGAGAAGTTTTGAATGTAATGAAGGACTTGGCAAAGGATGG
AATGACCATGGTGGTTGTGAGTCATGAAATGGGCTTTGCAAAAGAAGTTGCAGATAGAGTTATATTTATGGATGGTGGGA
AAATAGTTGAGCAGGGTACTCCTGAAGAAATATTTTCCAATCCTAAAGAAACCAGAACAAAAGCTTTCTTGGATAAGGTT
ATTAAATAG

Protein sequence : 
MIEGINLTKSFNNLTVFKDLNIKVKKGEVLVVIGASGSGKSTLLRCLNHLEDLDSGTIIIEGEELNPKDKKILRKITTKM
GMVFQSFNLFPHMTAIENVMEAPLIVKKEKKAVVLERAKKLLNKVGLGDKMDYYPSKLSGGQQQRVAIARALAMNPDIML
FDEPTSALDPELVGEVLNVMKDLAKDGMTMVVVSHEMGFAKEVADRVIFMDGGKIVEQGTPEEIFSNPKETRTKAFLDKV
IK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 3e-44 43
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 4e-44 43
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 8e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_0884 YP_002471349.1 hypothetical protein NC_012469.1.7686878. Protein 2e-27 41