Gene Information

Name : CKR_0872 (CKR_0872)
Accession : YP_002471337.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 966585 - 967496 bp
Length : 912 bp
Strand : -
Note : homology (Evalue<1e-4) to COG1131 [Q] ABC-type multidrug transport system, ATPase component

DNA sequence :
ATGGATAACATTCTAAAAACCTATAATTTATCTAAAAAATTTAAAAATTTTTATGCAGTTGATAATTTAAATATGACTAT
AGAAAAAGGTGATATATACGGTTTTCTTGGTGAAAATGGTGCAGGAAAGACTACCACTATAAGAATGATAATGGGACTTA
TAAAATCAACCTCTGGAGAAATAGAACTATTTTCCCAAAAAGTGTCCAGTAAAAATAAAAATCTACTTCAAAGAATAGGT
TCTATAATAGAATATCCTGGATTTTACCCAAACCTCACAGCTTCGGAAAATTTAGAAATACACAGACGTATGATGGGTGT
TCAGGAAAAAGATTCTATAAAAAACTCTTTAAAAGTAGTTGGTATAGGAAATGTGGAAAATAAAAAGGTAAAAGAATTTT
CCCTTGGCATGAAGCAAAGACTTGGAATTGCAAGAAGCCTTTTACATCATCCTGAATTTTTAATATTGGATGAACCTACA
AATGGCCTTGATCCTACTGGGATAAAAGAAATAAGAGAATTAATTATAGATTTAGCTCATAAACAAAATATTACATTTTT
AATATCTAGTCATATATTAAGCGAGATTCAACAAATGGCTACAAAAGTTGGAATAATTCATAAGGGTGTACTTTTAGAAG
AAATACCCTATGATGAACTTAAAAAAAGAAATAGACATTATATAAATATAAAAGTCGATAAGGATAAAAAATCTTGTTTT
ATCTTAGAAGAAAAGCTAAATATAAAAGATTATACACTGTGGGGAAAAAATAATCTAAGAGTTTATGAAAGACTTCAAGA
AGTTTCTACTATAAACAAGGTTCTTGTTTCAAATGATATACTTGTGGAGGAAATCTGCTTAAAAATAGACAGCCTGGAAG
ATTATTTTCTAAAACTTACAGGAGGAAATTAA

Protein sequence :
MDNILKTYNLSKKFKNFYAVDNLNMTIEKGDIYGFLGENGAGKTTTIRMIMGLIKSTSGEIELFSQKVSSKNKNLLQRIG
SIIEYPGFYPNLTASENLEIHRRMMGVQEKDSIKNSLKVVGIGNVENKKVKEFSLGMKQRLGIARSLLHHPEFLILDEPT
NGLDPTGIKEIRELIIDLAHKQNITFLISSHILSEIQQMATKVGIIHKGVLLEEIPYDELKKRNRHYINIKVDKDKKSCF
ILEEKLNIKDYTLWGKNNLRVYERLQEVSTINKVLVSNDILVEEICLKIDSLEDYFLKLTGGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-51 44
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-27 44
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-27 44
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-27 44
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-27 44
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 2e-48 42