Gene Information

Name : CKR_0057 (CKR_0057)
Accession : YP_002470522.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1132
EC number : -
Position : 69181 - 71088 bp
Length : 1908 bp
Strand : -
Note : homology (Evalue<1e-4) to COG1132 [Q] ABC-type multidrug/protein/lipid transport system, ATPase component

DNA sequence :
ATGATACTCCTTAAAGTTTTCAAGTGTTGTATGCTTTCAGAGTTTAGAAATGAAACTATATTTTTTAGAAAAGAGAGGTT
GCCCATGAAACAGAAAACTGCAATAGCCAAAAAACCGAAAACTGGAATGACAAGGCTAATGGAACTTGCGGCCACAAAAA
AACCGCTTATGATCACTTCGGTGATTTTATCCGCACTGGCTTCTATTGCTTCTTTTATTCCGTATATCGCTATTTACTAT
ATCGTTTTGGAGATCATGGGAATATATCCCGAATTCTCAGCCCTTGATGTAGAAAGGACAATTGGATTCGGCTGGATTGC
TTTTGGAGGTATTATTCTGAATATCCTATTGTACTTTTTAGCTCTGATGTGTTCACATCTTGCAGCCTTCGGTACGCTGT
ACGAATTGAAGGTAAATTTTGCATCACATCTCGCTAAAGTACCCCTAGGCTTTCACGTTTTAGTCGGCAGCGGTAAACTA
CGCAAGATTATGGATGAGAACATTGAAAAGATCGAAGGATTTATCGCCCATCAACTTCCCGATATGGTAGCATCTTTTGT
TGCACCACTTGTCATGTTCATCATTTTACTTGTTGTTGACTGGCGCTTTGGTCTCGCAGCAATCGTAGGCATTGTCATTG
CCTTTGTTATTCAGATGATTGCCTACGGAAATGATGGAGCAAAGACCATGATGAAAAAATATCAAACCTCACTAGAAGAT
ATGAACAATGCATCTGTAGAATATATAAGAGGCATTACCGTAGTCAAAGCTTTCAAACAAACCGTATATTCCTTTCGCAG
GATGCACAAAGCAATAAAGGAATATACTAATATGGTGATTCCCTATACATTAAGCTGGGAAAATTATATGTCGGCCTTTA
TCACAATTGTAAATAACATTTACTTATTTTTAATACCAGTAGGTATTCTAATTGGACTCAATACAACAGATTATATTTCA
TTTGCCAGCAAATTTATTTTTTATTTGATTTTTGTACCCTCTATTGCAACCATTATGACGAAAATTATGTATGTTTCTAC
CAGCGGCATCCAAATCATCGGTGGAGTAGAACGAATGGATGAAATTCTGCACACTGCATCACTGTCTCAACCCAAAAATC
CAAAAACAACTAAAAAGCATGAAATTATTTTTGAAAATGTATCTTTTTCTTATGCAGATCAAGAAGCTGCGGCCCTGTCC
CGCGTTTCATTCAGCGCGGAGGAAAATCAAATTACAGCTATTGTGGGCCCTTCCGGGGGAGGAAAAAGTACCATCGCCCA
TCTGATTCCGCGTTTTTTTGATGTAACAGAAGGAAGCATCCGAATTGGTGGGGTGGACATTCGCCATATGAATACAAATT
ATTTGATGGAAAAAGTTAGCTTTGTATTCCAGGATGTATTTCTCTTTAAACAGAGTATTATGGAAAATATCCGTATGGGA
AATCAAAATGCAACAAATGAACAAATAATTGCTGCGGCCAAAGCCGCCCAATGCCATGAATTTATTGAAAAGCTGCATAA
TAAATATGATACTGTGATTGGCACAAAAGGAATTCATCTATCAGGAGGGGAGCAGCATCGTATTGCCATTGCAAGGGCCA
TTGTAAAAAATGCACCAATTATTATACTAGATGAAGCAACTGCATTTTCGGATCCCGAGAATGAACATCTTATCCAAAGG
GCTTTTAAAAAGCTAATGCATGGCAAAACAGTGGTTATGATTGCACACCGTTTGTCTACCATACGGAGTGCTAATAAAAT
AGTGGTAATTGACAAGGGCCATCTTATCGAGCAGGGCATCCATGATGAACTACTTGCAAAAGAAGGAAAATATTTCGCCA
TGTGGAATATGTATGTCAAAATGTTGGATTGGAAGATGAACAGAAAGGGGGGCGAAACAAATGCTTAA

Protein sequence :
MILLKVFKCCMLSEFRNETIFFRKERLPMKQKTAIAKKPKTGMTRLMELAATKKPLMITSVILSALASIASFIPYIAIYY
IVLEIMGIYPEFSALDVERTIGFGWIAFGGIILNILLYFLALMCSHLAAFGTLYELKVNFASHLAKVPLGFHVLVGSGKL
RKIMDENIEKIEGFIAHQLPDMVASFVAPLVMFIILLVVDWRFGLAAIVGIVIAFVIQMIAYGNDGAKTMMKKYQTSLED
MNNASVEYIRGITVVKAFKQTVYSFRRMHKAIKEYTNMVIPYTLSWENYMSAFITIVNNIYLFLIPVGILIGLNTTDYIS
FASKFIFYLIFVPSIATIMTKIMYVSTSGIQIIGGVERMDEILHTASLSQPKNPKTTKKHEIIFENVSFSYADQEAAALS
RVSFSAEENQITAIVGPSGGGKSTIAHLIPRFFDVTEGSIRIGGVDIRHMNTNYLMEKVSFVFQDVFLFKQSIMENIRMG
NQNATNEQIIAAAKAAQCHEFIEKLHNKYDTVIGTKGIHLSGGEQHRIAIARAIVKNAPIIILDEATAFSDPENEHLIQR
AFKKLMHGKTVVMIAHRLSTIRSANKIVVIDKGHLIEQGIHDELLAKEGKYFAMWNMYVKMLDWKMNRKGGETNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1698 YP_003446800.1 multidrug ABC transporter ATPase/permease Not tested The aminoglycoside resistance gene cluster Protein 2e-174 63