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Name : CKR_0515 (CKR_0515) Accession : YP_002470980.1 Strain : Clostridium kluyveri NBRC 12016 Genome accession: NC_011837 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 560215 - 562035 bp Length : 1821 bp Strand : + Note : homology (Evalue<1e-4) to COG3344 [L] Retron-type reverse transcriptase DNA sequence : ATGACAACCTTAAAGAAAAAGCACGAGAAAAGACAAAAATTGAGAAACAGCGAATATTATGATATGCAAAAATATTTTGA CACGTTATATGAGGAAAGTAATAAAGGTAAGAAATTTAAAAACCTGCTAACTTTAATTTGCGATGAAAGAAATATTTTCC TAGCATACAGAAACATAAAGAAGAATAAGGGAAGTAAAACCCAAGGTGTTAACACAAATACAATAATGGATATTGGAGAG GAAAACCCTGATGAATTAGCAATATATGTTAGGGAGAGACTTATTAACTACAAACCTCAACCGGTTAGACGAGTGGAAAT ACCCAAGCCCAATGGTAAAATGAGACCTTTGGGTATACCTACAATTGAGGATAGAATAATACAGCAATGTATAAAACAAG TCTTAGAACCTATATGTGAAGCTAAGTTTCATAAAGATAGTTATGGCTTTAGACCCAATCGTAGTACACATCATGCTATA GCCAGAACTTACTCATTGGCAAATATAAATAAACTAACATACGTCGTAGATATTGATATAAAGGGTTTCTTCGATAATGT AAATCACAGTAAGTTGTTGAAACAAATGTGGACAATGGGTATACAGGATAAAAATCTACTATGTGTAATATCCAAAATGT TAAAAGCAGAAATTAAAGGGGTAGGGATACCAAATAAAGGTACACCTCAAGGTGGAATTTTATCACCATTGCTTTCAAAT ATAGTTCTAAATGAATTAGATTGGTGGATTAGTAACCAATGGCAAACACTCAAAAGCAAATTTCCTTACAAACGAGAAAT CTTTAAATATCAAGCATTGAAAAGAAGTAAATTAAAAGAAGTTTATATAGTAAGATATGCAGATGATTTTAAGCTATTCT GTAGAAGCTATAATAATGCTAAAAAGATATTTAAAGCTGTGACAATGTGGCTAAAAGAGAGATTAGGGCTGGAAATAAAT GAAGAAAAATCGTCTATAGTTAACCTAAAACAAAAATACTCTGAATTCTTAGGCTTTAAATTCAAACTAAAATCAAAAAA TAAAAAGCATGTTATAACATCAAATGTTAGTGATAAAGCGAAGGAAAGAATAAGAAAGACATTAATAGATAGAGTAAAAC AAATACAGAAAAGAGCAAATGCAAGTGTAGCAAGCAAGTACAATGCAACTGTTCTTGGAATGCATAATTACTATAAAGTG GCAACAGAAGTTAACATAGATTTTAGCAAAATAGCCTATTTGGTCAATCGAGTTATTTATAACAGATTAAGAGGTTTATC TACTAAAAAAGGTTTCAAAAGTGAAGCATATAAAAAACTCTATGGAAAATATAACTTCAAAGAAGTAAGTATAGCAAAAA TGACATTGTACCCGATTGCAGGAATAACTACAAAACCACCGTTAAACTTTCCAATAGGTGTAAATAGCTATACTGTTGAA GGAAGAAATAAAATACATGAAAATCTAAAAAGGTACAATGCCAAACTACTGAGATATATTACAGAAAACCCAATTAGGGG TGCTACAGTAGAGTTTAATGATAATAGGATATCGTTATATATAAGCCAAAATGGAAAATGTGGTATAACAGGCAAGGTAC TAGAACATGGAGAAATCGAAGTACACCATAAAATTCCTAAAGGAAAAGGTGGAACGGATAAATATAAAAATCTAATAATC GTTAGTGAAGCAATACACAAATTAATACATGCTACAGTAGCAGAAACCATAGAGAGATATAAAAATATACTAAAACTTGA TAAATACCAAATCAGAAAAATAAACACTCTTCGTAAAATGGTTGGAAATTGTGATGTATAG Protein sequence : MTTLKKKHEKRQKLRNSEYYDMQKYFDTLYEESNKGKKFKNLLTLICDERNIFLAYRNIKKNKGSKTQGVNTNTIMDIGE ENPDELAIYVRERLINYKPQPVRRVEIPKPNGKMRPLGIPTIEDRIIQQCIKQVLEPICEAKFHKDSYGFRPNRSTHHAI ARTYSLANINKLTYVVDIDIKGFFDNVNHSKLLKQMWTMGIQDKNLLCVISKMLKAEIKGVGIPNKGTPQGGILSPLLSN IVLNELDWWISNQWQTLKSKFPYKREIFKYQALKRSKLKEVYIVRYADDFKLFCRSYNNAKKIFKAVTMWLKERLGLEIN EEKSSIVNLKQKYSEFLGFKFKLKSKNKKHVITSNVSDKAKERIRKTLIDRVKQIQKRANASVASKYNATVLGMHNYYKV ATEVNIDFSKIAYLVNRVIYNRLRGLSTKKGFKSEAYKKLYGKYNFKEVSIAKMTLYPIAGITTKPPLNFPIGVNSYTVE GRNKIHENLKRYNAKLLRYITENPIRGATVEFNDNRISLYISQNGKCGITGKVLEHGEIEVHHKIPKGKGGTDKYKNLII VSEAIHKLIHATVAETIERYKNILKLDKYQIRKINTLRKMVGNCDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 1e-132 | 49 |
| ef0012 | AAM75218.1 | EF0012 | Not tested | Not named | Protein | 4e-92 | 45 |
