Gene Information

Name : CKR_0354 (CKR_0354)
Accession : YP_002470819.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG3682
EC number : -
Position : 373636 - 374016 bp
Length : 381 bp
Strand : +
Note : homology (Evalue<1e-4) to COG3682 [K] Predicted transcriptional regulator

DNA sequence :
ATGTTTTTGAGGAAAGTAGTTGCAATCTCTGATGCGGAACTAGAAATTATGAAAATAATATGGAAAAGCCCTAATATAAC
AGCAAATAAAATTATTGAAAAACTTAAAGGTAAAACTGAATGGAAACCTAATACCATAAAAACATTAATAAATAGATTAC
TTAATAAAGGGGCTATTGATTTTCAGAAGGAAGGAAAAGAATACTACTATTATAACTTGATTAATGAAGAGGAGTACAAA
ATTTCAGAGAGTAAGTCTTTTTTAAATAAAATATTTAATGGATCCTTGAATTTGATGTTAATGAACTTTATAAAAACTAA
GAACCTGTCAGAAAAAGATATTGAAGAATTGAAAAAAATTTTAAATAATGCCCATAAATAA

Protein sequence :
MFLRKVVAISDAELEIMKIIWKSPNITANKIIEKLKGKTEWKPNTIKTLINRLLNKGAIDFQKEGKEYYYYNLINEEEYK
ISESKSFLNKIFNGSLNLMLMNFIKTKNLSEKDIEELKKILNNAHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mecI YP_005754043.1 methicillin resistance regulatory protein MecI Not tested Type-XI SCCmec Protein 8e-15 46
mecI BAA82218.1 methicillin resistance protein MecI Not tested Type-II SCCmec Protein 2e-16 45
mecI NP_370567.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 5e-16 45
mecI NP_373280.1 methicillin resistance regulatory protein Not tested Type-II SCCmec Protein 3e-16 45
mecI YP_190060.1 methicillin-resistance regulatory protein MecI Not tested Type-II SCCmec Protein 3e-16 45
mecI YP_039517.1 methicillin resistance regulatory protein MecI Not tested Type-II SCCmec Protein 8e-14 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_0354 YP_002470819.1 hypothetical protein CP001581.1.gene771.p Protein 2e-23 53
CKR_0354 YP_002470819.1 hypothetical protein AM180355.1.gene595.p Protein 1e-21 48
CKR_0354 YP_002470819.1 hypothetical protein FR823292.1.gene6.p01 Protein 2e-15 46
CKR_0354 YP_002470819.1 hypothetical protein NC_009782.5560220.p0 Protein 2e-16 45
CKR_0354 YP_002470819.1 hypothetical protein NC_002758.1120003.p0 Protein 2e-16 45
CKR_0354 YP_002470819.1 hypothetical protein NC_002745.1122814.p0 Protein 8e-17 45
CKR_0354 YP_002470819.1 hypothetical protein NC_002952.2861158.p0 Protein 3e-14 44