Gene Information

Name : CKR_0315 (CKR_0315)
Accession : YP_002470780.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 331753 - 332541 bp
Length : 789 bp
Strand : +
Note : homology (Evalue<1e-4) to COG1136 [R] ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
ATGGGTATAGTTATAGAAACAAAAAATTTAAAAAAGGTTTACGGTTCAAAATCTATGTCTTTTACTGCTTTAGGTGGAAT
TGATTTGCAGGTTGAAGAAGGAGAATTTCTTGGCATAATGGGGCCTTCAGGAGCAGGTAAAACTACTTTGCTGAATATTA
TTTCTACAATTGATAATCCAACTAGTGGAAGTTATTTTTTTCAGGGAGAGGATATGTCGAAGGTTAAAGGTAAAGCTCTG
GCAAGTTTTAGAAAGAATAAAATAGGTTTTATATTTCAGGATTTTAACCTTTTGGATAATATGTCAGTTCAGGATAATAT
AGCTCTTCCACTTGCACTCGGGAAGGTTAAATACAGTGAAATAACAAGGAAAGTCAATGAGATATCGGATTTTTTGGGAC
TTAAGGAACATCTAAATAAATATCCCTATCAGCTTTCTGGGGGACAAAAGCAGAGAGTTGCAGCGGCAAGAGCGCTTATG
ACAACGCCTTCTGTGATATTTGCGGATGAACCTACGGGTTCTCTGGATTCAAAGTCTGCGGCAGAGCTTCTAGGATGTCT
TACAGATATGAATATAAAATATAAGACAACTATAATAATGGTAACACATGATGCCTTTGCTGCCAGCTATTGCAGAAGAA
TAATGTTTATAAAAGATGGAAAAATTCATGCAAGACTGGATAAAAACAAGGATAGAAAGGAATTTTTCCATAGGATTATG
GATATGGTTTCCTCCATGAGCAGCGGTATAGATTATTATGTACAGGATGATAAGAGGAGGGATTATTAA

Protein sequence : 
MGIVIETKNLKKVYGSKSMSFTALGGIDLQVEEGEFLGIMGPSGAGKTTLLNIISTIDNPTSGSYFFQGEDMSKVKGKAL
ASFRKNKIGFIFQDFNLLDNMSVQDNIALPLALGKVKYSEITRKVNEISDFLGLKEHLNKYPYQLSGGQKQRVAAARALM
TTPSVIFADEPTGSLDSKSAAELLGCLTDMNIKYKTTIIMVTHDAFAASYCRRIMFIKDGKIHARLDKNKDRKEFFHRIM
DMVSSMSSGIDYYVQDDKRRDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-30 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_0315 YP_002470780.1 hypothetical protein CP001581.1.gene798.p Protein 3e-40 45
CKR_0315 YP_002470780.1 hypothetical protein NC_012469.1.7686878. Protein 3e-42 44
CKR_0315 YP_002470780.1 hypothetical protein CP001581.1.gene598.p Protein 3e-41 44
CKR_0315 YP_002470780.1 hypothetical protein BAC0607 Protein 1e-21 41