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Name : CKR_3390 (CKR_3390) Accession : YP_002473855.1 Strain : Clostridium kluyveri NBRC 12016 Genome accession: NC_011837 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 3821815 - 3823365 bp Length : 1551 bp Strand : - Note : homology (Evalue<1e-4) to COG1961 [L] Site-specific recombinases, DNA invertase Pin homologs DNA sequence : GTGGCGGCCTACTGCCGGGTCAGTACCGAACAGGAAGAACAACAGTCCAGCTACGCTGCTCAGATCGCTTATTATACAGA TAAAATCAGCAAAAATAAGGATTGGGAGCTTGCCGGTATTTTTGCCGACGAGGGCATCACCGGAACCAGCGCCAAAAAGC GTACCGAATTTCTCAAGCTCATGGTATTGTGTGAAAAAGGCAAAGTTGACATGGTGCTGACCAAATCCGTTTCCCGGTTT TCCAGAAACACGCTGGATGCCATCGGGTATATCCGAAAGCTCAAAGCAAAGGGCATCCCCATTATATTTGAAAAAGAGGG CATCAACACGATGGAGATGGCCAGTGAAATGGCGCTGTGCTTCCTCAGCGGCTTTGCGCAGGCTGAGAGCGAATCCATCA GCCGCAACGTCACATGGGGTAAACGCCAGAGCTTTAAAAGCGGAAAGGTGCCCTTTCAATATTCCCGCCTGCTGGGTTAC GAAAAAGGTGAGGACGGTCAGCCAAAGATCGTGCCGGATGAAGCGGAAATTGTCAAACGGATTTTCCGGAGCTATTATTC CGGTGCCAGCGTCCGAACAATAAAGGAATCGCTGGAGGCAGATAACATTCTCTCGCCCACCGGCAAGCAAGAATGGTCAG TTGGCGTACTGCAATATATGCTCCGCAACGAGCGTTACATTGGAGATGCCCTACTGCAGAAAACCTATGTGGCGGACTGC CTGACCAAGGAAACCCGGAAAAACAACGGCGAAATCCCGCAATATTATGTAACCGGAAACCATGAGCCGATTATATCAAA GGATTTATTCAACCTCGTACAGGAGGAAATCGCCCGGAGAGCTGGTAAGAGAAAAGTGGCCAAGAAAGCGGTGAAAACTG AAAAAGGGAAATACAGCAGCAAATATGCGCTGACTGAGCTTCTCTGCTGTGGTGACTGCGGGACGCAATATCGCCGGGTT ACTTGGGCAAGGAACGGCAAGAAAAAGGTGGTCTGGCGCTGCATCAACCGCTTGGAATACGGTACGAAATACTGCAAGGA ATCGCCCACCATTGAGGAAAGCCGGTTGCACCAAGCCATTGTCACAGCCCTGAATCGGCTGGATGAGGATAAGGCAGATG TCATTGAAACCCTCAAGGCAGGCCTGCGGCTGGCCATCGGTACGCAGGATGATGACAGTTTCAATGAAGCTGCTGTCAAG AACCGTATCGCTGAGCTACAGAGCGTCATGATGGATTTAGTGGAACTCAGCTCCAAATCTAGTGCCGGTGCGGATTACTT CGATGCCGAGTTTGAGGAAATAGCTGCGGAGATAAAGGGACTGCAGGGGCAGCTTGGGGAGCATCAAGAGCAGACCATGC TCGCCCAAAACACACAAGCTCGAATCCATGAGCTGCTTTACACGCTGGAACACATTGACCTTAGTGTAAAGGAATATCGT GATGATGTAGTTAAGGGGATTATCACCAAGGTGGTGGTTTTATCCACAGATCGAATCCGGATTACTTTTGATAACAACAT GGAGATGGAACAGGAGCTGCCGGGTGAATAA Protein sequence : MAAYCRVSTEQEEQQSSYAAQIAYYTDKISKNKDWELAGIFADEGITGTSAKKRTEFLKLMVLCEKGKVDMVLTKSVSRF SRNTLDAIGYIRKLKAKGIPIIFEKEGINTMEMASEMALCFLSGFAQAESESISRNVTWGKRQSFKSGKVPFQYSRLLGY EKGEDGQPKIVPDEAEIVKRIFRSYYSGASVRTIKESLEADNILSPTGKQEWSVGVLQYMLRNERYIGDALLQKTYVADC LTKETRKNNGEIPQYYVTGNHEPIISKDLFNLVQEEIARRAGKRKVAKKAVKTEKGKYSSKYALTELLCCGDCGTQYRRV TWARNGKKKVVWRCINRLEYGTKYCKESPTIEESRLHQAIVTALNRLDEDKADVIETLKAGLRLAIGTQDDDSFNEAAVK NRIAELQSVMMDLVELSSKSSAGADYFDAEFEEIAAEIKGLQGQLGEHQEQTMLAQNTQARIHELLYTLEHIDLSVKEYR DDVVKGIITKVVVLSTDRIRITFDNNMEMEQELPGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU05_0953 | YP_001198319.1 | DNA recombinase | Not tested | 89K | Protein | 7e-82 | 47 |
| SSU98_0960 | YP_001200518.1 | DNA recombinase | Not tested | 89K | Protein | 7e-82 | 47 |
| smi_1713 | YP_003446815.1 | site-specific recombinase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-84 | 43 |
