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Name : CKR_3298 (CKR_3298) Accession : YP_002473763.1 Strain : Clostridium kluyveri NBRC 12016 Genome accession: NC_011837 Putative virulence/resistance : Resistance Product : hypothetical protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 3708835 - 3710628 bp Length : 1794 bp Strand : + Note : homology (Evalue<1e-4) to COG1132 [Q] ABC-type multidrug/protein/lipid transport system, ATPase component DNA sequence : ATGAAGAAAAAAACAGGTGTTTCCCGTCTTTTAGAAATTGCGGGAGAGAAAAGAGGCCTTCTTACCTGGTCCGCCATACT GTCCTCCATAAGTGCTTTGTGTATGCTTATTCCTTATCTTTCGATTTATTTCATTTTAAAGGAACTACTACAAAACGCTG CTACTCCTTATCTGATTGATAAGATAGAGGTAATACATTGGGGCTTTATTGCCCTTTTGGGGCTATTAGGAGGACTAATT ATGATGTACGCAGGTGGAATGTGCTCGCATATTGCGGCATACCGAATCCTTTACGGCCTACGTATAAAACTGTCAGATCA TATTGGCAATCTTTCTCTTGGTTACTTAAACCAAAACTCCACAGGAAAAATTAAAAAGAATCTAGAATTAAATGTAGAAA AAATCGAATCTTTCATTGCCCACCAATTACCTGACATGGTTAATGTAGTGGTTACAATCATTATCATGTTCATTGCAATG TTTTCCCTTAACATTGTACTTGCACTTTGCTGCCTTATTCCTATTGTTACTGGTTTCTTTGCACAAGCATCTATGATGAT GGGTAATAAGTCTAAAGAAAGCTTGAAAGGATATTATGACGCTTTAGAAAGAATTAATTCTTCTGCAGTTCAATATGTTC GCGGTATGCCTGCTGTAAAAGTATTTGGACAAACTGTGCATTCTTTCAGAAAGTTCTATCAGGACATGATTGACTATCGA AATTTCTGTATCAAATTTGGAGAACAGTTTAGAACTGGATATATTCTCTTTAAGGTTCTACTGGGGTCATTTATAACTTT TATTCTTCCTATTGGAGTTTTCTTGCTCACTAGAGACCCACAGAACATAGCCCTTGCAGTCACCCTGCTATTTTTCTTAA TTATGGTACCGGGTATAGCAGCACCCATGTATAAGGCAAATAATCTTGCAGCCACTATGCAGGAAATATGTGAAGGTACA TCAAGGATTGATGCTATTTTAAATGAAAAGTCTGTCCCCGAACCCGAAAATCCTTTGATTCCCACTTTCTATGAAGTGGA GTTTGACAAAGTTTCCTTTTCTTATAAAGCCGAATCCAATCAGGCTCTCTCTAACATCAGCCTTACAGCACCCCAGGGTA AGATCACTGCACTGGTAGGTCCATCTGGTTCCGGAAAATCAACCATTGCACAACTCATACCTCGTTTTTGGGATGTGCAA GAAGGCGAAATTCGAATCGGTGGAGTAGATGTATGCAGTATTCCAACAGAGAGCTTAATGAATATAGTATCTTTCGTATT TCAGGATTCATTTCTTTTTTATGATACTCTGTATGAAAATATCCGAGTTGGAAAACTAGATGCCACAGAGGAAGAAGTGT ATGCAGCGGCAAAAGCCGCCCAATGTCATGAATTTATTGAAAGGCTGCCTAAAGGATATAGCACGTTGATTGGCGAAGGT GGAACCTATCTGTCTGGAGGCGAAAAACAAAGGATTTCTGTTGCACGGGCAATTCTGAAAAACGCTCCCATCCTTGTACT GGATGAAGCTACTGCCTTTGCTGACCCTGAGAATGAATATCAGATGCAGCTTGCTTTAAAAGAACTTATACGAGATAAGA CGGTAATCGTTATTGCACATCGACTTTCTTCTATTTGTGCAGCAGAACAGATTTTAGTTCTGCAAAAAGGTGAAATCATC CAGCGTGGAACCCATGATAAATTGATATTAATAGAAGGCTTATATCAAAAAATGTGGCAGGCGTATATTACAGCTGCCAC ATGGAATGTCGGGAAGGGAGAGAATGTTCTATGA Protein sequence : MKKKTGVSRLLEIAGEKRGLLTWSAILSSISALCMLIPYLSIYFILKELLQNAATPYLIDKIEVIHWGFIALLGLLGGLI MMYAGGMCSHIAAYRILYGLRIKLSDHIGNLSLGYLNQNSTGKIKKNLELNVEKIESFIAHQLPDMVNVVVTIIIMFIAM FSLNIVLALCCLIPIVTGFFAQASMMMGNKSKESLKGYYDALERINSSAVQYVRGMPAVKVFGQTVHSFRKFYQDMIDYR NFCIKFGEQFRTGYILFKVLLGSFITFILPIGVFLLTRDPQNIALAVTLLFFLIMVPGIAAPMYKANNLAATMQEICEGT SRIDAILNEKSVPEPENPLIPTFYEVEFDKVSFSYKAESNQALSNISLTAPQGKITALVGPSGSGKSTIAQLIPRFWDVQ EGEIRIGGVDVCSIPTESLMNIVSFVFQDSFLFYDTLYENIRVGKLDATEEEVYAAAKAAQCHEFIERLPKGYSTLIGEG GTYLSGGEKQRISVARAILKNAPILVLDEATAFADPENEYQMQLALKELIRDKTVIVIAHRLSSICAAEQILVLQKGEII QRGTHDKLILIEGLYQKMWQAYITAATWNVGKGENVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-111 | 43 |
