Gene Information

Name : CKR_3192 (CKR_3192)
Accession : YP_002473657.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3598819 - 3599508 bp
Length : 690 bp
Strand : -
Note : homology (Evalue<1e-4) to COG1136 [R] ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
TTGACAAAGCATCTTCTGGAAGTTAAAGACTTATGTAAATGGTATGAGCAGGATAAAAATCGCTATCTTGTTTTAAAAAA
TCTTGATTTTAAGGTGGAGCAAGGCTCATTTGTGGTTGTAATGGGCAAGTCAGGCAGTGGAAAGACCACTTTGTTGAATA
TTCTGGGACTTCTTGATAATTTCAATGAGGGAAGTTATGTATTTAATGGTCAGGATGTTACAAAAATGACAGAAAACCAG
CGTTGTTCTTTTAGAAATAATCATATTGGTTTTATATTTCAACAGTTTTATTTAATTGAATCTTTAACAGTAGCTCAAAA
CATTGAACTTCCACTATTGTATCATGGGGGATATAGCAGCGAGCAAAGAATTGACATGGTAAAAAAAAGTCTTCAAGATG
TTGAACTTGAGGAAAAATTTAAAAGTTATCCAAATGAGTTATCTGGGGGGCAACAACAGCGTATTTCAATTGCAAGAGCG
CTTGTTAATGAGCCTGATGTTATTTTGGCAGATGAGCCTACAGGTGCACTGGACTGGAAAACCGGCCTGAAAATTATTGA
TATATTGGTTAAACTTAATAAACAAAATAAAACTATTATAATGGTAACTCATGATAGTGATCTTAAAAAATACGCTACTC
ATTGTGTTTTTCTCAAAGACGGCATTTTTTCTGAGGAGGATAATATATGA

Protein sequence : 
MTKHLLEVKDLCKWYEQDKNRYLVLKNLDFKVEQGSFVVVMGKSGSGKTTLLNILGLLDNFNEGSYVFNGQDVTKMTENQ
RCSFRNNHIGFIFQQFYLIESLTVAQNIELPLLYHGGYSSEQRIDMVKKSLQDVELEEKFKSYPNELSGGQQQRISIARA
LVNEPDVILADEPTGALDWKTGLKIIDILVKLNKQNKTIIMVTHDSDLKKYATHCVFLKDGIFSEEDNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_3192 YP_002473657.1 hypothetical protein NC_012469.1.7686878. Protein 6e-53 49
CKR_3192 YP_002473657.1 hypothetical protein NC_008702.1.4606598. Protein 4e-39 44