Gene Information

Name : CKR_3132 (CKR_3132)
Accession : YP_002473597.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3529450 - 3530133 bp
Length : 684 bp
Strand : -
Note : homology (Evalue<1e-4) to COG1136 [R] ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
ATGAATTTATTGGAAGTTAAATCAATTTCTAAAACCTATGGCAGCGGTGAAGCTGCCGTACATGCATTAAAAGATATCAG
CTTTTCCGTTCCGAAAGGTGAATTTGTCACAATAGTTGGAGAATCCGGCTCCGGCAAGAGTACACTTCTGAATATGGTAG
GTGCGCTTGATACGCCTACTTCCGGCAAGGTATTTATCGATGGTAAAGATATTTTTTCCATGAAGGATAGCAGCTTGACA
ATTTTTCGGCGCAGAAATATTGGATTTATTTTTCAGAGTTTTAATCTGATTCCAGAATTGAATGTTGAGCAAAACATCAT
ATTTCCCGTACTGCTTGATTATCAAAAGCCCGATAAAAAGTATCTTGAGGAACTACTTACGGTGCTTAATTTGAAAGAAC
GCCGCCATCATTTACCCAGTCAATTATCAGGTGGACAGCAACAGCGTGTAGCAATAGGACGTGCACTAATTACGCAACCG
TCGCTTATCCTTGCCGACGAGCCGACGGGTAATCTGGACACGCAAAACAGCAGTGAAGTGATTACTTTGCTAAAAGAAGC
TGCAAGAAAGTATCAGCAGACCATTGTTATGATTACCCATAGCCGAAGTATCGCACAGACCGCAGACCGGATACTGCAAG
TGTCCGATGGCATACTGACCGATTTAGGGAGGTGCCGCGAATGA

Protein sequence : 
MNLLEVKSISKTYGSGEAAVHALKDISFSVPKGEFVTIVGESGSGKSTLLNMVGALDTPTSGKVFIDGKDIFSMKDSSLT
IFRRRNIGFIFQSFNLIPELNVEQNIIFPVLLDYQKPDKKYLEELLTVLNLKERRHHLPSQLSGGQQQRVAIGRALITQP
SLILADEPTGNLDTQNSSEVITLLKEAARKYQQTIVMITHSRSIAQTADRILQVSDGILTDLGRCRE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-38 45
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 9e-41 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_3132 YP_002473597.1 hypothetical protein CP001581.1.gene798.p Protein 2e-101 97
CKR_3132 YP_002473597.1 hypothetical protein CP001581.1.gene598.p Protein 2e-58 54
CKR_3132 YP_002473597.1 hypothetical protein NC_012469.1.7686878. Protein 7e-44 45
CKR_3132 YP_002473597.1 hypothetical protein NC_008702.1.4606598. Protein 1e-36 43