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Name : CKR_0243 (CKR_0243) Accession : YP_002470708.1 Strain : Clostridium kluyveri NBRC 12016 Genome accession: NC_011837 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3505 EC number : - Position : 257179 - 259071 bp Length : 1893 bp Strand : - Note : homology (Evalue<1e-4) to COG3505 [N] Type IV secretory pathway, VirD4 components DNA sequence : TTGCCGACAGGGAGCGCACCAAACCGCGACAAAAGGAACGAAAACGGGAGGTGGTGCGGAATGAACGATAAAATCCGTAG ATATGTGATTCCCAATGTTCCCTATCTGTTGGTGCTGTGGTTCTGTCTGAAGCTCGGCACAGCCTACCGCCTTGCGGCAG GTGCAGACTTCGGAAATAAACTGGTTGGCATGATAAAGACTATAAGCCCGGCGTTTGCTTCATTTGCGCCGGGCTTTGTG CTGTCCGATTGGCTCATTGGCCTTGCCGGGGCGGTCATACTCCGGCTGGTGGTATGGTATAAGGTAAAAAACGCAAAAAA GTTTCGGAGGGATGTGGAATATGGCTCGGCCCGGTGGGGAACGGCAAAGGACATCAAGCCCTTTATCGACCCAAAATTCA GCAACAACGTGATACTAACCGGGACAGAGCTTCTTACCATGAATACCCGACCCGCCAATCCCGCCAACGCCCGAAACCTT AACTGCTGTATCATAGGCTCCAGCGGAAGCGGGAAAACTCGCTTTTGGCTGACCCCACAGCTTTTACAGGCTCATTCATC CTATGTGGTGGTTGACCCAAAGGGCGGCATTTTAGAGCAGGTCGGCTCTTTTCTGAAAAAGCAGGGCTACAAAATCAAGG TATTCAATTCCATTGATTTTGCCCGGTCAATGCACTATAACCCGCTGGCCTACTTAAAGACGGAAAGCGATATTTTGAAG TTTGTAAACGCTCTGATTGAGAACACAAAGGGCGACGGTAAAGAGGGTGATCCATTCTGGACGAAAGCAGAAACCTTGCT TTATTGTGCTTTAATCGGCTATATCGTCCTTGAGGGGCCGGAGGAAGAACGCCATATCAATACCCTAGTGGATATGCTGA ACAGCATGGAAACAAGGGAAGATGATGAAAATTTCAAGAACGCCGTGGACTATATGTTCCTTGGCTTGGAAAAGCGCAAT CCCAACCATTTTGCGGTGCGCCAGTATAAAAAATTCAAGCTCGCCAGCGGGAAAACCTCGAAAAGTATCCTGATTTCCTG CGGAGCCAGACTTGCCCCATTTGATATTGGACAGCTCCGGGAGATTATGAGCTATGATGAAATGGAACTTGACCGCATGG GCGATAAGAAAACCGCCACCTTCTTCATCATCAGCGACACCAATACGACCTACAACTTTATTGTTGCCCTTGCTTTTTCG CAGATGTTCAATCTTTTGTGTGAACGGGCTGACAGCAAATACGGCGGCAGGCTCCCCCATCATGTAAGGGTATTATGGGA CGAAGCCGCCAACACGGGACAGGTTCCGCAATTGGAAAAATTGGTTGCCGTTATCCGCTCCCGCGAAATATCCTTATGCC TGTTTTTACAGGCGCAAAGCCAGCTCAAAGCCTTATATAAAGACCACGCTGAAACCATTATGGGAAATATGGACAGCGTG ATTTTTCTTGGTGGCCGGGAACATTCCACCATCAAGGAACTTTCGGAGGTTTTGGGGAAAGAAACCATTTCCATGCAGAC GGAAAGCCGGACGCGGGGCCAGTCGGAAAGCTATGGACAGAACTTGCAACGGCTCGGCAAGGAGCTTATGACAATGGACG AATTGACCACTATGCCGGGCAACAAGTGTATTTTACAGCTTCGCGGCCTGCATCCATTCCTTTCCCCCAAATACGATTTA AAACAGCACCCCAATTACAGGTATACCGCCGAAGCTGATAAGCGCAACGCTTTTGACGCTTCAAAGCTGGTAAACCGCCG CATGAAAAAGCTCAATCCCAATGAGCAGTATACCGTTTATGAAGTAAATGCCGACGAGGAAACCGCCGCCATAGACGAGA ACGAGGACATTCTCAACTATGATGATGTGGACGACCCGGAAGCATTTGCATAA Protein sequence : MPTGSAPNRDKRNENGRWCGMNDKIRRYVIPNVPYLLVLWFCLKLGTAYRLAAGADFGNKLVGMIKTISPAFASFAPGFV LSDWLIGLAGAVILRLVVWYKVKNAKKFRRDVEYGSARWGTAKDIKPFIDPKFSNNVILTGTELLTMNTRPANPANARNL NCCIIGSSGSGKTRFWLTPQLLQAHSSYVVVDPKGGILEQVGSFLKKQGYKIKVFNSIDFARSMHYNPLAYLKTESDILK FVNALIENTKGDGKEGDPFWTKAETLLYCALIGYIVLEGPEEERHINTLVDMLNSMETREDDENFKNAVDYMFLGLEKRN PNHFAVRQYKKFKLASGKTSKSILISCGARLAPFDIGQLREIMSYDEMELDRMGDKKTATFFIISDTNTTYNFIVALAFS QMFNLLCERADSKYGGRLPHHVRVLWDEAANTGQVPQLEKLVAVIRSREISLCLFLQAQSQLKALYKDHAETIMGNMDSV IFLGGREHSTIKELSEVLGKETISMQTESRTRGQSESYGQNLQRLGKELMTMDELTTMPGNKCILQLRGLHPFLSPKYDL KQHPNYRYTAEADKRNAFDASKLVNRRMKKLNPNEQYTVYEVNADEETAAIDENEDILNYDDVDDPEAFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2328 | NP_815983.1 | TraG family protein | Not tested | Not named | Protein | 6e-142 | 53 |
