Gene Information

Name : CKR_2687 (CKR_2687)
Accession : YP_002473152.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3021808 - 3022485 bp
Length : 678 bp
Strand : -
Note : homology (Evalue<1e-4) to COG1136 [R] ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
GTGAATGCTGTTGTACAAATTTCAGATTTAAAAAAATATTATGGTAGAGAACCTAATCTTGTGAAAGCCTTGGATGGCGT
AAATCTATGTGTGGAACCAGGGGAATTTATTGCCATTGTAGGTACATCGGGAAGTGGAAAATCTACTCTGCTGCACATGA
TGGGAGGCCTTGATAAACCAACTTACGGCAGTGTCATAATTGAAGGCAGAGAATTATCTGAGATGAATGATGAAGATCTC
ACTATTTTCAGGAGAAGACAAATTGGCTTTGTCTTTCAAAATTATAATCTGGTTCCTATTTTGAATGTGTATGAAAATAT
TGTGCTGCCTGTTGAATTGGATGGAAACAAGGTGGATAAGGATTATGTGGACAAGGTTATTTCAATGCTTCATTTGGAGG
ATAAGTTAAATAGTCTGCCCAATAACCTTTCTGGAGGTCAGCAGCAGAGGGTAGCTATTGCGCGGGCCCTTGTAAGCAAA
CCTGCTATTATTCTTGCAGATGAGCCCACGGGAAACTTAGACAGCCGCACCAGCCAGGAAGTGATGGGACTTTTAAAAAT
GAGTAACAATGAATTCCATCAAACTTTGGTGATGATAACTCACAATAGTGAAATTGCCCAGCTTGCCCATAGAATTATCC
GTATTGAAGATGGAAAAATTATGGACAGGGAGGTGTGA

Protein sequence : 
MNAVVQISDLKKYYGREPNLVKALDGVNLCVEPGEFIAIVGTSGSGKSTLLHMMGGLDKPTYGSVIIEGRELSEMNDEDL
TIFRRRQIGFVFQNYNLVPILNVYENIVLPVELDGNKVDKDYVDKVISMLHLEDKLNSLPNNLSGGQQQRVAIARALVSK
PAIILADEPTGNLDSRTSQEVMGLLKMSNNEFHQTLVMITHNSEIAQLAHRIIRIEDGKIMDREV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_2687 YP_002473152.1 hypothetical protein CP001581.1.gene598.p Protein 7e-83 74
CKR_2687 YP_002473152.1 hypothetical protein CP001581.1.gene798.p Protein 1e-56 53
CKR_2687 YP_002473152.1 hypothetical protein NC_012469.1.7686878. Protein 3e-38 45
CKR_2687 YP_002473152.1 hypothetical protein NC_008702.1.4606598. Protein 2e-34 42