Gene Information

Name : CKR_2359 (CKR_2359)
Accession : YP_002472824.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 2664105 - 2666039 bp
Length : 1935 bp
Strand : -
Note : homology (Evalue<1e-4) to COG0749 [L] DNA polymerase I - 3'-5' exonuclease and polymerase domains

DNA sequence :
ATGAATTCTATATCTATTGATATTGAGACATTTAGTAGTGCCAATCTTCAAAAATGTGGAGTCTACCGTTATGCCGAGAG
TGATGATTTTGAAATTCTGTTGTTTGGTTATTCGGTTGATGGCGGTGCAGTTCAGGTGGTCGATCTTGCCTGTGGAGAGA
AAATCCCAAATGAAATAATCAATGCCCTTATGGATAATTCCGTTACCAAATGGGCCTTTAATGCTATGTTTGAGCGTGTT
TGCTTATCAAAATGGCTTAACCTTACTGATTATCTTGACCCTACATCCTGGAAATGTTCAATGGTATGGTCGGCTTATAT
GGGACTTCCGCTTTCTCTTGAGGGTGTCGGTGCAGTTTTAGGATTGGAAAAACAAAAATTGACGGAAGGCAAAGACCTTA
TTAAATATTTCTGTACACCGTGCTCCCCCACTAAATCAAACGGAGGACGAGTTCGCAATCTACCGAAACACGACATGGAT
AAATGGGAGCGATTTAAAGCATATAACATCCGTGATGTGGAAGCCGAGATGTCAATACAGCAGAGACTATCTAAATTCCC
GATTCCAGAGAATATATGGTCAGAATATCATCTTGACCAGAAAATCAATGATCGTGGTATCGCTATTGACATGGCTTTTG
TAAAACAAGCCGTCAAGATGGATGAACAGTCGCGGGAAAAGCTAATGGCTTTAATGCAGGATATAACTAATTTGGAGAAT
CCAAACTCTATACAACAAATGAAAGAATGGCTTGCTGATAACGGATTGGAAACAGATAGTCTTGGTAAAAAAGCAGTTGC
TGAGATGTTAAAGACAGCACCTGAACCACTAGGCACCGTTTTGGAACTTCGTCAGCAGCTTGCAAAATCATCGATAAAAA
AATACACAGCAATGGAGAATGCAGTATGTAATGATGGTCGTGCAAGAGGAATGTTTCAGTTTTATGGAGCAAACAGAACT
GGTAGGTTTTCGGGCAGGCTTATTCAACTGCAAAATCTCCCTCAAAACCATATGCCTGATTTGGAACAGGCTCGTGCCTT
AGTTCGTAGCGGAAACTTTGATGCTCTTACCTTAATTTATGATTCTATCCCGGAGGTGCTGTCGGAACTTATCCGTACTG
CTTTTGTACCGCAGGAGGGCATGAAGTTTATAGTTGCAGATTTTTCAGCGATTGAAGCTCGCGTTATCGCCTGGCTTGCG
GGAGAAAAATGGAGAATAGATGTATTCCAAAATGGCGGTGACATTTACTGTGCAAGTGCATCTCAGATGTTTAATGTACC
TGTGGAGAAAAACGGTGTTAATGGACATCTTCGTCAGAAGGGAAAAATTGCTGAATTAGCCCTAGGTTACGGTGGATCTG
TTGGAGCATTGAAATCAATGGGTGCTTTGGAGATGGGAATTGAAGAAGAGGAACTTCAACCTCTTGTAACGGCTTGGAGA
CAATCCAATCCCAATATTACAAAACTATGGTGGGATGTTGACCACGCTGTAAAAACCTGCGTTAAGCAGAAAATTCCTAC
AGAAACACACGGCATTAAATTTATATATCAAAGTGGGATGCTCTTTATTGTCCTTCCTTCCGGCAGGCGGCTTTCCTATG
TAAAACCTCGTATGGGAGAGAATGTATTTGGTGGTGAGTCAGTTACTTATGAAGGGGTTGGTGGGACAAAGAAATGGGAA
AGAATCGAAAGCTACGGTCCAAAATTTGTAGAGAATATTGTCCAGGCAATCAGTCGTGACATCTTGTGCCACGCCATGCA
GACGTTAAAGAATTGTTCCATTGTGGCTCATGTGCACGATGAAATTATAATCGAAGCGGACATGAGGATGTCACTTTCTA
CTATTTGTGAACAAATGGCTAGAACCCCAACATGGGCAAATGGTCTGTTACTTAGTGCTGATGGCTATGAGTGTCAGTTT
TATCAAAAAGATTAA

Protein sequence :
MNSISIDIETFSSANLQKCGVYRYAESDDFEILLFGYSVDGGAVQVVDLACGEKIPNEIINALMDNSVTKWAFNAMFERV
CLSKWLNLTDYLDPTSWKCSMVWSAYMGLPLSLEGVGAVLGLEKQKLTEGKDLIKYFCTPCSPTKSNGGRVRNLPKHDMD
KWERFKAYNIRDVEAEMSIQQRLSKFPIPENIWSEYHLDQKINDRGIAIDMAFVKQAVKMDEQSREKLMALMQDITNLEN
PNSIQQMKEWLADNGLETDSLGKKAVAEMLKTAPEPLGTVLELRQQLAKSSIKKYTAMENAVCNDGRARGMFQFYGANRT
GRFSGRLIQLQNLPQNHMPDLEQARALVRSGNFDALTLIYDSIPEVLSELIRTAFVPQEGMKFIVADFSAIEARVIAWLA
GEKWRIDVFQNGGDIYCASASQMFNVPVEKNGVNGHLRQKGKIAELALGYGGSVGALKSMGALEMGIEEEELQPLVTAWR
QSNPNITKLWWDVDHAVKTCVKQKIPTETHGIKFIYQSGMLFIVLPSGRRLSYVKPRMGENVFGGESVTYEGVGGTKKWE
RIESYGPKFVENIVQAISRDILCHAMQTLKNCSIVAHVHDEIIIEADMRMSLSTICEQMARTPTWANGLLLSADGYECQF
YQKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 4e-151 49
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 4e-151 49
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 6e-152 49