Gene Information

Name : CKR_2319 (CKR_2319)
Accession : YP_002472784.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0488
EC number : -
Position : 2623718 - 2625217 bp
Length : 1500 bp
Strand : -
Note : homology (Evalue<1e-4) to COG0488 [R] ATPase components of ABC transporters with duplicated ATPase domains

DNA sequence : 
ATGAAAACATGCGATTATAGACAGGAGGAAAATGTTATGGAATTGATATTAAAAGCAAAAGACATACGTGTGGAATTTAA
AGGACGCACTTGTTTAGATATAGATGAATTAGAAGTGTATGATTATGACCGTATTGGTTTAGTAGGAGCAAATGGTGCAG
GAAAAAGCACGTTACTCAAGGTACTTTTAGGAGAATTAACTCCCCCAGGATGTAAAATGAATCGTCTGGGTGAACTTGCC
TATATCCCTCAGTTGGACGAAGTAACTTTGCAGGAGGAGAAAGATTTTGCACTTGTGGGTAAGCTCGGTGTTGAGCAATT
AGATATACAGACCATGAGCGGTGGTGAAGAAACAAGACTTAAAATAGCACAGGCCTTATCGGCACAGGTTCATGGTATTT
TAGCGGATGAACCTACGAGTCATTTAGACCGTGAAGGAATTGATTTTCTAATTGGACAGCTAAAATATTTTACAGGTGCA
CTGTTAGTTATTAGCCATGACCGCTATTTTCTTGATGAGGTAGTAGATAAAATATGGGAACTGAAAGATGGCAAAATCAC
TGAGTATTGGGGAAACTATTCTGATTATCTTCGTCAGAAAGAGGAAGAACGCAAGAGCCAAGCTGCAGAATACGAACAAT
TTGTTGCGGAACGTGCCCGATTGGAAAGGGCTGCGGAGGAAAAGCGAAAACAGGCTCGTAAAATAGGACAGAAGGCAAAA
GGTGCTTCAAAGAAAAAAAGTACTAAAGGCGGAGGGCGTTTAGCTCATCAAAAATCAATAGGAAGTAAGGAAAAAAAGAT
GCATAATGCCGCTAAATCCCTAGAACATAGGATTGCGGCCTTAGGAAGTGTAGAAGCTCCAGAAGATATTCGTAGGATTC
GTTTCAGGCAAAGTAAAGCATTGGAGCTCCACAATCCATATCCTATTGTCGGTAAGGAAATTAATAAAATATTTGGAGAT
AAGGTACTGTTTGAAAATGCATCTTTTCAAATTCCGCTTGGAGCAAAAGTGGCGTTAACTGGTGGTAATGGAACCGGAAA
AACAACTTTAATCCAAATGATCTTAAACCATGAAGATGGAATTTCTATTTCACCTAAGGCAAAAATAGGTTACTTTGCAC
AAAATGGTTACAAGTACAACAGTAATCAGAAAGTCCTGGAGTTTATGCAGGAGGATTGTGATTACAATGTTTCAGAAATT
CGTTCCGTGCTAGCATCCATGGGATTTAAGCAGAACGATATTAGAAAAAGCTTATCTGTTTTAAGTGGCGGCGAAATTAT
GAAATTATTGCTAGCTAAAATGCTTATGGGTAGATATAACATCTTACTAATGGATGAACCCAGCAATTTCCTTGACATAC
CAAGCTTAGAGGCTTTGGAAATACTAATGAAGGAGTATGCCGGAACTATAGTGTTTATCACCCATGACAAACGGCTGCTT
GATAATGTGGCTGATGTGATTTATGAAATCAAAGATAAGAAATTAAACTTAGTCCGATAA

Protein sequence : 
MKTCDYRQEENVMELILKAKDIRVEFKGRTCLDIDELEVYDYDRIGLVGANGAGKSTLLKVLLGELTPPGCKMNRLGELA
YIPQLDEVTLQEEKDFALVGKLGVEQLDIQTMSGGEETRLKIAQALSAQVHGILADEPTSHLDREGIDFLIGQLKYFTGA
LLVISHDRYFLDEVVDKIWELKDGKITEYWGNYSDYLRQKEEERKSQAAEYEQFVAERARLERAAEEKRKQARKIGQKAK
GASKKKSTKGGGRLAHQKSIGSKEKKMHNAAKSLEHRIAALGSVEAPEDIRRIRFRQSKALELHNPYPIVGKEINKIFGD
KVLFENASFQIPLGAKVALTGGNGTGKTTLIQMILNHEDGISISPKAKIGYFAQNGYKYNSNQKVLEFMQEDCDYNVSEI
RSVLASMGFKQNDIRKSLSVLSGGEIMKLLLAKMLMGRYNILLMDEPSNFLDIPSLEALEILMKEYAGTIVFITHDKRLL
DNVADVIYEIKDKKLNLVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
msr(E) YP_005176244.1 macrolide efflux protein Not tested ICEPmu1 Protein 2e-139 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_2319 YP_002472784.1 hypothetical protein NC_012469.1.7685970. Protein 0.0 94