Gene Information

Name : CKR_2312 (CKR_2312)
Accession : YP_002472777.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2617058 - 2617678 bp
Length : 621 bp
Strand : -
Note : homology (Evalue<1e-4) to COG1136 [R] ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
GTGATTAACCATGTTTCGCTTACAATCCCAAAAGGGGAGTTTACCGCAATCATCGGTTCCTCTGGCTCCGGCAAATCCAC
ATTGCTTCACATTATCGGCGGTGTGGACGTGCCAACAAGCGGAAAGGTGTATTTAGATGGACAGGATGTATATGCCCAAA
GCAATGAAAAGCTCGCAATTTTCCGCAGGAGGCAGGTCGGACTGATTTACCAGTTTCACAACCTCATTCCCACTTTGAAT
GTGGTGGAAAACATCACCTTGCCTATCCTGATGGACAAGCGAAAAGTTAACGAGGAACGGCTGAATGATTTATTGGAACT
GCTTGGGCTAAAGGACCGAAAAACACATTTACCCAATCAGCTTTCAGGTGGTCAGCAGCAGCGTGTTGCCATCGGGCGTG
CTTTGATGAATGCACCGGCGGTGATGCTTGCCGATGAACCCACTGGAAGTTTGGACAAACGAAATGGACATGAAATCATC
AAACTGCTGAAAGAAAGCAATAAAAAATACAATCAGACCCTTATTATAGTCACACATGATGAAAACATCGCTTTGCAAGC
AGACCGTATTATCGGCATATCAGATGGCAAAGTAGTACGAGACGAGAAGGTTAGATCATGA

Protein sequence : 
MINHVSLTIPKGEFTAIIGSSGSGKSTLLHIIGGVDVPTSGKVYLDGQDVYAQSNEKLAIFRRRQVGLIYQFHNLIPTLN
VVENITLPILMDKRKVNEERLNDLLELLGLKDRKTHLPNQLSGGQQQRVAIGRALMNAPAVMLADEPTGSLDKRNGHEII
KLLKESNKKYNQTLIIVTHDENIALQADRIIGISDGKVVRDEKVRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-28 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-29 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-26 41
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 5e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_2312 YP_002472777.1 hypothetical protein CP001581.1.gene798.p Protein 2e-48 57
CKR_2312 YP_002472777.1 hypothetical protein CP001581.1.gene598.p Protein 1e-42 52
CKR_2312 YP_002472777.1 hypothetical protein NC_012469.1.7686878. Protein 7e-33 44
CKR_2312 YP_002472777.1 hypothetical protein NC_008702.1.4606598. Protein 4e-25 43