Gene Information

Name : CKR_2267 (CKR_2267)
Accession : YP_002472732.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG4951
EC number : -
Position : 2564660 - 2567566 bp
Length : 2907 bp
Strand : -
Note : homology (Evalue<1e-4) to COG1061 [L] DNA or RNA helicases of superfamily II

DNA sequence :
ATGGATTATAATGAGCTTTATGATAGGTATGTAAAGCTGTTGGAAGAAAATAAAATGCTAAAAGAAAAAAACAAAAATTT
GAGAGAGTATATTAGATTACAAGTACCCAATTTATTTATGGATGATAAATGTAAAGAACTGACTAAAACTAATACTGATA
CGTCAATTCGGGGAAATAAATGTATACAAGTAAATAAAAATAGCGCACCGAAAGATAAAATAAGGCTCTTTATGTCACTA
TTTAAAGGTAGAGAAGATGTGTATGCTAAACGATGGCAGAGTGAAAATGGTAAATCCGGTTATTCGCCTGTGTGTGTAAA
TGAATGGGTCAGGGGAATGTGCTACAAACCTAAAGTAAAGTGTTCAGAATGTAAAAATAAAAAATATGCTCCTTTGAATG
AAAATGCAATTGATAGACATCTGAGAGGAATTGAAGTTTTAGGTATTTATCCCATGATTAAAGATGAAACTTGTTATTTT
GTTGCAATTGATTTTGATGATGATGGATGGGAAAATGATATTTCCATTCTGCAGGAAATATGTATTGAAAAGAAAATACC
TTTTGCAGTTGAACGTTCAAGATCCGGCAATGGGGCACATCTATGGTTTTTCTTTAAAGAAAAGATAGCTGCAGCATCTG
CCAGGAAATTTGCTACAGCACTGCTAACCTATGCTATGACCAAAAGGTATAAAATTAAATTTAAATCATATGATAGATTA
TTCCCCAATCAAGATACTATGCCCAAAGGAGGATTGGGAAATCTTATAGCACTGCCGATGCAGAAATTTGTCAGAAAAAA
TAATAATACGGTTTTTGTAGATAAAAATTTTAAGCCATACGAGGATCAGTGGAAATTTCTAAGTTCTGTTGAAAAATTAA
TAAGGAATCAAATAGAATGCTACATTTCTGAAATTTGTACCAATAGTGAATTAGGTGATTTAAAAGAAGACAAAGAGGAA
ACTGACAAACCATGGAAAGGGAATAATGAAATCCGAAAGCTAAGTATTGAAGATTTTCCAGACAACGCACATATTATAAA
GGCCAATATGCTTTTTATAAGTAAAGAAGGCTTTTCTAATAGAACTTTAAATTCTATAAAACGAATAGCAGCTTTTAAAA
ATCCGGAATTCTACAAAGCACAGGCGCTGAGGTTGTCTACATTTGATAAACCAAGAGTTATTTCTTTATCAGAAGAAACA
TCAGAATATTTATGCATTCCAAGAGGTTGTGAAATGGAGCTTAATAATTTTCTTAAAGAAAATAAAGTTGGTTTTGAATA
TAATGATAATACATATAGTGGCAGGATAATTTCAGTTCTTTTTAATGGAAAGCTTGGAGAAGAACAGGCAGTTGCTGTAG
ATGCACTGCTGAAATTTGATAATGGAGTGCTATCGGCTGCCACTGGTTTTGGTAAAACAGTCCTTGGAGCTAAATTAATA
GCGGAAAGAAAAGTCAGTACTCTTGTAATTGTACATACCCGGCAGCTGCTGGAACAATGGAAAGAAAAATTGAAATATTT
TTTAATAATAGATGAATCTTTAGCAATTGATAAAACTAAAAGAAAAGGAAGAAAAAAGAATATTGACGTTATAGGTCAAA
TAGGGTCAGGCAAAAACAATTTAAACGGTATTGTTGATATTGCAATTATGCAGTCTTTGGTAAGAAAAGGCGAGGTAAAA
GAATTGGTAAAAGATTATGGAATGGTTTTAGTTGATGAATGCCACCATGCATCAGCTTTTAATTTTGAACTTATACTAAA
AAGTATATCAGCTAAATATGTTTATGGGTTAACAGCAACTCCGATAAGAAAAGACGGACACCATCCTATAATATTTATGC
AGTGCGGTCCTGTCAGGTATAGGGTAAATGCGAAGAAACAGGCTGAGAAGAGTTCTTTTGAACATTATGTTATCCCAAGG
TTTACTTCTTTTAGGAAACCAGTTTGTCAAAATGAAAAAGAGTGGTCAATATCAGAAATATATTCTGTGATAGGCACAAG
TCAGATCAGAAATAATCTGATTATTGATGATGTTACAAATTGTGTAAAAGAGGGACGAAATCCAATAGTTTTAACGGAAA
GGACATCTCATGTTGAAATACTCTCAGATATGTTAAAAGAAAAATTGTCTTATGTCATTACACTTACGGGAAAAATGTCA
GCAAAAGAGAGAAAATCTGAGTTCGATAAACTTTTGAACATACCGACGGGAAATAGTGTAGTAATAGTGGCTACTGGTAG
GTTTATCGGGGAGGGCTTTGATGAACCTAGGTTGGATACTCTTTTTCTGGCAATGCCTATATCATGGAAGGGGACTCTAC
AGCAGTATGCTGGTAGGCTTCATAGGATATATGAAAATAAAAATGAAGTTCAAATATATGATTATGTCGATGTCCATGTT
GATGTACTGGAAAGAATGTATGAAAAAAGATTAAAGGGGTATGCAGCAATAGGATATTCAGCCAAAAGTGAAAGCAAACC
TATTGAGGCAATAAATTCAATTTATAACAATAATAATTTTTTAACTGTATTCAGCAATGATGTTTTCACTGCGAAAAATG
AAATTATCATAGTTAGTCCTTTTGTAAGCAAAAGGAGACTTTCCCAAATGTTAAAACTTTTGATGATTGCCATAAAAAAT
TGCGTGAACATTAAGGTAATTACCCGCCCCAAAACAGACTTTAAAGGAAAAAATATATTTAATTTAGAAGAAATGCATGA
AACTATGAAGGTTTCCGGGATAGCTGTAATTTTGAAGTCAAACATACATCAGAAATTTGCAATAATTGATGAAAAAATAG
TGTGGTATGGAAGTATTAATCTTTTAAGTTATGGGAATGCAGAGGAAAGTATCATGAGATTGGAGAGTATAAATATTGCA
AATGAGCTTTTGGATACTGTTGAGTGA

Protein sequence :
MDYNELYDRYVKLLEENKMLKEKNKNLREYIRLQVPNLFMDDKCKELTKTNTDTSIRGNKCIQVNKNSAPKDKIRLFMSL
FKGREDVYAKRWQSENGKSGYSPVCVNEWVRGMCYKPKVKCSECKNKKYAPLNENAIDRHLRGIEVLGIYPMIKDETCYF
VAIDFDDDGWENDISILQEICIEKKIPFAVERSRSGNGAHLWFFFKEKIAAASARKFATALLTYAMTKRYKIKFKSYDRL
FPNQDTMPKGGLGNLIALPMQKFVRKNNNTVFVDKNFKPYEDQWKFLSSVEKLIRNQIECYISEICTNSELGDLKEDKEE
TDKPWKGNNEIRKLSIEDFPDNAHIIKANMLFISKEGFSNRTLNSIKRIAAFKNPEFYKAQALRLSTFDKPRVISLSEET
SEYLCIPRGCEMELNNFLKENKVGFEYNDNTYSGRIISVLFNGKLGEEQAVAVDALLKFDNGVLSAATGFGKTVLGAKLI
AERKVSTLVIVHTRQLLEQWKEKLKYFLIIDESLAIDKTKRKGRKKNIDVIGQIGSGKNNLNGIVDIAIMQSLVRKGEVK
ELVKDYGMVLVDECHHASAFNFELILKSISAKYVYGLTATPIRKDGHHPIIFMQCGPVRYRVNAKKQAEKSSFEHYVIPR
FTSFRKPVCQNEKEWSISEIYSVIGTSQIRNNLIIDDVTNCVKEGRNPIVLTERTSHVEILSDMLKEKLSYVITLTGKMS
AKERKSEFDKLLNIPTGNSVVIVATGRFIGEGFDEPRLDTLFLAMPISWKGTLQQYAGRLHRIYENKNEVQIYDYVDVHV
DVLERMYEKRLKGYAAIGYSAKSESKPIEAINSIYNNNNFLTVFSNDVFTAKNEIIIVSPFVSKRRLSQMLKLLMIAIKN
CVNIKVITRPKTDFKGKNIFNLEEMHETMKVSGIAVILKSNIHQKFAIIDEKIVWYGSINLLSYGNAEESIMRLESINIA
NELLDTVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1129 NP_286664.1 helicase Not tested TAI Protein 7e-156 43
Z1568 NP_287072.1 helicase Not tested TAI Protein 7e-156 43