Gene Information

Name : CKR_2219 (CKR_2219)
Accession : YP_002472684.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2517330 - 2518385 bp
Length : 1056 bp
Strand : -
Note : homology (Evalue<1e-4) to COG0609 [PH] ABC-type cobalamin/Fe3+-siderophores transport systems, permease components

DNA sequence :
GTGGATATAAGCTCTAAAAAAATTGTTATTGGAAAGTCTCAAAATTACAAGTTAGTTATTATGAGAAAAGTAATAGCGTT
GATGATTTTAATACTACTTGTATTAATAAGCTTTGTAATTGATCTCTCAACTGGACCGGCAATGTTGAATATTTTTGATG
TAATCACTTCATTGACGAACCCTGAGTCACTGGGCAGAAAAGTGAATATAATTGTCAGGGTAATCAGATTACCAATAGCA
ACTATGGCACTATTAGCTGGTGCAGGATTAGCAATTGCAGGTATGGAAATGCAGACTATACTTAATAATAATCTTGCTAG
TCCGTATACACTGGGAATATCTTCGGCAGCATCTTTTGGAGCATCAATATCTTTGATTTTCGGATATGCATTTTTACCCC
AATATATGAATAATTATGCCACACCTATATTTGCTTTTGCTTTTTCATTAATATCATCCTTCTTTATTTATACTATTGGA
AAGATAAAAAAGGATAGAGGAACAATAATTTTAGCTGGGATTGCAATAAGTTTTATGTTTACAGCGTTAAATTCTATTCT
CACATACTTTGTACCAGATGAAATTTTAAGAGGTATAACTAACTGGTCACAAGGGTGTATCTTAGGAGCTACATGGCAGC
AGGATGCAATAGTGTTTGTAGTACTTGTAATAGTGACACCAATTCTCTTTAGAGAATCCTGGAAGCTGACATCATTATGT
ATGGGGGAAAGTACTGCAGCAGCTTTAGGGATCAATGTAGAAAAGTTAAGAACAAAGGTTTTAATATTATCTTCATTAAT
AACATCCATCGCAGTTTGCTTTGTTGGAACCATAGGCTTTGTTGGATTGGTTGCACCCTATGTGGCTAAATCTTTAGTAG
GAGAAGAACAGAGGTTTTTTATTCCAGCATCTATGTTAACTGGAGCGTTTATGTTATCAGTTTCATCTGTGTTAAGCAAG
GTTGCTATATCAGGAGTACAGATTCCTTTAGGAATAGTTACTTCAATTATAGGTATTCCGTTTTTATTGGTACTTATTTT
AAAACAAGGAAGGTGA

Protein sequence :
MDISSKKIVIGKSQNYKLVIMRKVIALMILILLVLISFVIDLSTGPAMLNIFDVITSLTNPESLGRKVNIIVRVIRLPIA
TMALLAGAGLAIAGMEMQTILNNNLASPYTLGISSAASFGASISLIFGYAFLPQYMNNYATPIFAFAFSLISSFFIYTIG
KIKKDRGTIILAGIAISFMFTALNSILTYFVPDEILRGITNWSQGCILGATWQQDAIVFVVLVIVTPILFRESWKLTSLC
MGESTAAALGINVEKLRTKVLILSSLITSIAVCFVGTIGFVGLVAPYVAKSLVGEEQRFFIPASMLTGAFMLSVSSVLSK
VAISGVQIPLGIVTSIIGIPFLLVLILKQGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp6B NP_938505.1 membrane protein permease Irp6B Not tested Not named Protein 3e-39 42
irp6B YP_005124376.1 membrane protein permease Irp6B Virulence Not named Protein 7e-39 41