Gene Information

Name : CKR_1904 (CKR_1904)
Accession : YP_002472369.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2137376 - 2138485 bp
Length : 1110 bp
Strand : -
Note : homology (Evalue<1e-4) to COG0117 [H] Pyrimidine deaminase

DNA sequence :
ATGAATTATGACAATAAAGATGAACATTATATGGAAATTGCTTTAGAGCTGGCATCAAAGGGAGAAGGTTTTGTGAATCC
AAATCCACAGGTGGGAGCCCTTGTAGTAAAAGAAGGTAACATAGTAGGAAGAGGTTATCACAAATTTTATGGAGGACCTC
ATGCAGAGGTATATGCATTAAAAGAAGCAGGTGATAAAGCTGCAGGCGGGCAGATATACGTGACTTTGGAGCCTTGTTCT
CATTACGGCAAAACTCCACCCTGTGTAGAAGCTATAGTAAGAGCAGGAATAAAAAAAGTAGTGGTTGCATTAAAGGATCC
TAATCCACTAGTTTCAGGTAGAGGCATAGAGTTTTTAAGGAATAAGGGAATAGAAGTGGTTACAGGCGTTTTAGAAAAAG
AAGCCTTAAATATAAATGAAATATTTATAAAATATATCAGTGATAAGCTTCCTTTTGTAATATTGAAATCTGCAGTAACT
TTAGATGGTAAAATAGCAACTGTTACAGGACAGTCAAAGTGGATAACCTGTGAAGAATCCAGAAATTTTGTACATCACAT
AAGAAATAGGGTTATGGCAATTGCAGTGGGGATAGGTACCATACTTTCGGATAATCCACTTTTAACCACAAGACTTGAGA
AAAAATGTAAAAGTCCTATAGCTGTGGTTTTAGATTCTAAGTTAAGAATACCTCTGGATTGTAAGATTTTTGATACACTT
AAATATAGGAAAATCATAATAGCTTGTACAGAGGGATATGATGAAGATAAAAAGTATGAAATTGAGAAAATGGGAGTGGA
TGTAATTATCTGTCCTAAAGATGAATCTGGTCATGTGAATCTAAAGATTCTAATAGAAAAGTTAGGAAATATTGGTATAG
ATAGTTTGTTTATAGAGGGAGGGGGCTCACTTAATTTTTCTGCTTTAAGTTCAGGAATTGTAGATAAAGTTATTTATTTT
ATAGCCCCTAAAATAATAGGTGGATTAGAGGCCAAAACTTCTGTAGAAGGAAAAGGTATTGAAGATTTAAATAAAGCCGT
TAAATTAAAAAATATTAGCTATTTAAAATCAGGAGAAGATATGATGATTCAAGGATATGTAGAAAAGTAA

Protein sequence :
MNYDNKDEHYMEIALELASKGEGFVNPNPQVGALVVKEGNIVGRGYHKFYGGPHAEVYALKEAGDKAAGGQIYVTLEPCS
HYGKTPPCVEAIVRAGIKKVVVALKDPNPLVSGRGIEFLRNKGIEVVTGVLEKEALNINEIFIKYISDKLPFVILKSAVT
LDGKIATVTGQSKWITCEESRNFVHHIRNRVMAIAVGIGTILSDNPLLTTRLEKKCKSPIAVVLDSKLRIPLDCKIFDTL
KYRKIIIACTEGYDEDKKYEIEKMGVDVIICPKDESGHVNLKILIEKLGNIGIDSLFIEGGGSLNFSALSSGIVDKVIYF
IAPKIIGGLEAKTSVEGKGIEDLNKAVKLKNISYLKSGEDMMIQGYVEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-45 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-45 41