Gene Information

Name : CKR_0156 (CKR_0156)
Accession : YP_002470621.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 183444 - 185894 bp
Length : 2451 bp
Strand : +
Note : homology (Evalue<1e-4) to COG0542 [O] ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
GTGAAATACATTATGATGTTTGGAAGATTTACAGAAAGAGCACAAAAGGTATTAATTTATGCTCAAGAAGAGGCACAAGC
ACTCCAACATGGTTATGTGGGTACAGAGCATATACTTTTGGGAGTATTGAAAGAGGATGGAATAGCTAAGAACTTTTTAA
ATAACATGAATATTACTATAGAAACAGTAAGAAGTTTTATAGAAGAGTATGAAGGCAGAGGAGAGATTGATTTATACAAT
AAGGAAATACCTCTTACTCCGAGAACAAAAAGACTTTTGGAGTTGAGCTTATTTGAAGCTAGAAATTTAAATCACAACTA
TATTAGTCCAGAACACATTCTGCTTGCGTTGATTAGAGAGGCAGAAGGGGTTGCGTTTACTATTTTAAATAATTTAGGTG
CTGATTTTAATAAATTAAGAAAACAGCTTATAGATTCTCTTTCAGGAGAACAATCTGTTAGTTCAAATAATTCTAAAAAA
GAAAATGGAGAGCCTACTCCAACCTTGGATCAATTTGGCAGAGACTTAACTGATATGGCCAGGGAGGGAAAATTGGATCC
AGTTATAGGTAGAGAAAAAGAAACTCAGAGAGTTTTGGAAATATTAAGCAGAAGAACTAAAAACAATCCTTGTCTTATAG
GAGATCCAGGGGTAGGTAAGACAGCCATAGCAGAAGGATTGGCAGAAAAAATAGTGGCAGCCAATATACCTGAACTTTTA
AAAGGAAAAAGAGTAGTTACTTTGGATCTTTCTTCAATGATAGCAGGTTCCAAATACAGGGGCGAATTTGAAGAAAGACT
TAAAAAAGTTATGGAAGAGATAAGGAAATCAGGGAATGTAATATTATTTATAGATGAAATTCATACCATAATAGGAGCTG
GAGCTGCAGAAGGAGCTATAGATGCTTCTAACATATTAAAGCCGGCTTTGGCTAGAGGAGAAATACAATGTATAGGAGCA
ACCACTATAGATGAATATAGGAAGTATATAGAAAAAGATGCTGCCCTTGAGAGAAGATTTCAGCCTATATTAGTAGGAGA
ACCTACTAAAGAAGAAGCAGTCTTGATATTGAAAGGTTTAAGAGATAAATATGAAGCCCATCACAGAGTGAAAATAACGG
ACGAAGCTATTGAGGCTGCAGTAAATTTGTCTGATAGATATATTACAGATAGATATTTACCGGATAAGGCTATTGACCTT
ATTGATGAAGCGGCTGCTAAAGTAAGAATACAAAATTTGATTGCTCCGCCGGATTTAAAGAATTTAGAAGTTGAATTGGA
AAAAGCAACTAAAGAAAAAGAAGACTCCATTAGATTACAAGATTTTGAAAAGGCTGCTAAGTTAAGAGATATAGAAAAAG
AATTGAAGGATAAGTTAGAAGGCTTAAAAACTAACTGGAAGACTAAAAAAGAAGTATCTACATTATTAGTAGGAGAAGAA
AAAATTGCTTCTGTAGTGTCACAGTGGACTAATGTACCTGTGGAAAAATTAACCGAAAAAGAATTACAGAGATTACTAAA
ATTAGAAGACATTCTTCATAAAAGGGTGATAGGTCAGGATGAAGCAGTTAAATCTATAGCAAGGGCAGTAAGAAGGTCTA
GGGTTGGACTGAAGGATCCTAAAAGACCTATAGGTTCATTTATATTTTTAGGACCTACGGGGGTTGGAAAAACTGAACTA
TCCAAAGCACTGGCAGAGGCTATGTTTGGTGATGAAAATAATCTTATAAGGATTGATATGTCTGAATATATGGAAAAACA
CACCGTATCTAAACTTATAGGATCTCCTCCAGGATATGTAGGATATGATGAGGGAGGACAGCTTACGGAAAAGGTAAGAA
GAAATCCTTACTCAGTAGTACTGTTTGATGAAATCGAAAAAGCACATCCTGAGGTATTTAATATACTGCTGCAAATACTT
GAGGATGGAAGATTGACGGATGGAAAAGGAAAAACTATAAACTTTAAGAATACTATAATTATAATGACATCCAATGTAGG
GGTATCTACCATTAAAAAGCAAAAATCTATGGGATTCACTATTGTAAGTGATAATGAAAAACAAGATGAATATGATAAAA
TGAAAGACAATATAATGGAAGAGTTGAAAACTTCTTTTAGACCTGAATTTTTAAATAGGATTGACGATATTATAGTATTC
CACCAATTACAAGAAGATGATTTAAAACAGATAGTAAAGATTATGTTAAATGATGTTTCTATGAGACTTAAAGAGAAGGA
CATAGATATTAATTTCAACGAAAAAGCACAAGAATTGTTAGCAAAAGAAGGATTTGATATAACTTATGGAGCCAGACCTC
TTAGAAGGGCTATAACTAAAACCGTAGAAGACAAACTTTCAGAAGAAATGTTAAAGGGTAATGTTAAAAGAGGAGATAAA
GTGGAAGTAGCTGTTCAAGGAGAAGAGTTGACTTTTAATAAAGTTGATTAA

Protein sequence :
MKYIMMFGRFTERAQKVLIYAQEEAQALQHGYVGTEHILLGVLKEDGIAKNFLNNMNITIETVRSFIEEYEGRGEIDLYN
KEIPLTPRTKRLLELSLFEARNLNHNYISPEHILLALIREAEGVAFTILNNLGADFNKLRKQLIDSLSGEQSVSSNNSKK
ENGEPTPTLDQFGRDLTDMAREGKLDPVIGREKETQRVLEILSRRTKNNPCLIGDPGVGKTAIAEGLAEKIVAANIPELL
KGKRVVTLDLSSMIAGSKYRGEFEERLKKVMEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGA
TTIDEYRKYIEKDAALERRFQPILVGEPTKEEAVLILKGLRDKYEAHHRVKITDEAIEAAVNLSDRYITDRYLPDKAIDL
IDEAAAKVRIQNLIAPPDLKNLEVELEKATKEKEDSIRLQDFEKAAKLRDIEKELKDKLEGLKTNWKTKKEVSTLLVGEE
KIASVVSQWTNVPVEKLTEKELQRLLKLEDILHKRVIGQDEAVKSIARAVRRSRVGLKDPKRPIGSFIFLGPTGVGKTEL
SKALAEAMFGDENNLIRIDMSEYMEKHTVSKLIGSPPGYVGYDEGGQLTEKVRRNPYSVVLFDEIEKAHPEVFNILLQIL
EDGRLTDGKGKTINFKNTIIIMTSNVGVSTIKKQKSMGFTIVSDNEKQDEYDKMKDNIMEELKTSFRPEFLNRIDDIIVF
HQLQEDDLKQIVKIMLNDVSMRLKEKDIDINFNEKAQELLAKEGFDITYGARPLRRAITKTVEDKLSEEMLKGNVKRGDK
VEVAVQGEELTFNKVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_0156 YP_002470621.1 hypothetical protein VFG0079 Protein 0.0 62
CKR_0156 YP_002470621.1 hypothetical protein VFG0080 Protein 2e-149 49