Gene Information

Name : CKR_1544 (CKR_1544)
Accession : YP_002472009.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1745174 - 1745851 bp
Length : 678 bp
Strand : -
Note : homology (Evalue<1e-4) to COG1136 [R] ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
ATGATAGAAATAAAAAATGTCTCAAAGATTTATAATATGGGTAAAGAAAAGGTAATTGCACTGGACAATGTGAATTTAAC
TATTAAAGAAGGTGAATTTGCAGCTATAGTAGGACCTTCAGGTTCAGGTAAATCTACTTTGATGCACCTTGTGGGAGGGC
TTGATACACCTACATCAGGAAGTATCTTTATAGATGGAAAGGATATAAGCAAGCTTAAGGATAAAGATATGTCAAAGTAT
AGAAATAAGTCTGTGGGCTTTGTATTTCAATCCTTTAACCTTGAAAATACACAAACTGCACTTGAAAATGTGATGATGCC
CTTGATATTTTCTGGTATTGATAAAAGAAAGAGGAAAGTAAAGGCGGAAAAGGCCCTTGAAATGGTAGGACTTAAAGATA
AGATAAAAAATAAGCCCACAGAGCTTTCGGGAGGACAGCGTCAGAGGGTGAGTATAGCAAGAGCTCTTGTAAATGAACCT
AGAATAATTTTTGCAGATGAGCCAACGGGAAATTTGGATTCAAAAAATGGACAACTTATAATGAACCTTTTAAGTGATTT
GAATGAGAAAGGGTATACAGTTATTATGGTAACCCATAACATGGAGGAGGCAAAAAGGGCAAGGAGAATTATAAGTATAA
AAGATGGTAAAGTGCAGGAGGTACTAAATAATTTCTAA

Protein sequence : 
MIEIKNVSKIYNMGKEKVIALDNVNLTIKEGEFAAIVGPSGSGKSTLMHLVGGLDTPTSGSIFIDGKDISKLKDKDMSKY
RNKSVGFVFQSFNLENTQTALENVMMPLIFSGIDKRKRKVKAEKALEMVGLKDKIKNKPTELSGGQRQRVSIARALVNEP
RIIFADEPTGNLDSKNGQLIMNLLSDLNEKGYTVIMVTHNMEEAKRARRIISIKDGKVQEVLNNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-31 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_1544 YP_002472009.1 hypothetical protein NC_012469.1.7686878. Protein 2e-52 53
CKR_1544 YP_002472009.1 hypothetical protein CP001581.1.gene598.p Protein 6e-42 46
CKR_1544 YP_002472009.1 hypothetical protein NC_008702.1.4606598. Protein 1e-42 44
CKR_1544 YP_002472009.1 hypothetical protein CP001581.1.gene798.p Protein 3e-43 43
CKR_1544 YP_002472009.1 hypothetical protein NC_012469.1.7685735. Protein 8e-37 42