Gene Information

Name : CKR_1530 (CKR_1530)
Accession : YP_002471995.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1728650 - 1729324 bp
Length : 675 bp
Strand : -
Note : homology (Evalue<1e-4) to COG1136 [R] ABC-type transport systems, involved in lipoprotein release, ATPase components

DNA sequence : 
ATGGGTGATATATTGAAAGTTGAAAATTTAACAAAAATCTATGGTGAAGGAGAAAACATGGTAGAGGCATTAAAAAATGT
ATCCTTTACTGTAAATAGAGGTGAATTTATAGCAATAATGGGAGCTTCCGGTTCCGGTAAAAGCACCCTTCTCCACACCA
TAGGTGGACTTGATAGGCCCACATCTGGCAAGGTGTATGTTGATGGTGAGGATATATATAAACTAAATGAACAAAAGTTG
GCTATATTCAGAAGGAGAAATATTGGCTTTGTATTTCAATTCTTTAACCTTATACCGGTTTTAGATGTGGAGGAAAATAT
ATCTCTTCCTGCACTTTTAGATAAGGAAAAAGTGGATAAGAATTATTTAAATGAAGTAATAGGTATGCTGGGATTGAAAG
ATAGGATAAAGCACCTTCCATCCCAGCTTTCGGGAGGTCAGCAGCAGAGGGTATCCATTGGCAGGGCTTTTATAAATAAA
CCTGCTTTGATTCTGGCAGATGAACCTACTGGAAATTTAGACAGTAAAAATGGCAGAGAAGTTATAGAACTTTTAAAATT
GTCCTCTAAAAAATATAATCAAACTTTGATTGTTATAACCCATGATATGAATGTAGCTGAGCAAGCAGAAAAGATAATTA
CCATAAGTGATGGGGAGATAAAATGGAATGAGTAA

Protein sequence : 
MGDILKVENLTKIYGEGENMVEALKNVSFTVNRGEFIAIMGASGSGKSTLLHTIGGLDRPTSGKVYVDGEDIYKLNEQKL
AIFRRRNIGFVFQFFNLIPVLDVEENISLPALLDKEKVDKNYLNEVIGMLGLKDRIKHLPSQLSGGQQQRVSIGRAFINK
PALILADEPTGNLDSKNGREVIELLKLSSKKYNQTLIVITHDMNVAEQAEKIITISDGEIKWNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 5e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKR_1530 YP_002471995.1 hypothetical protein CP001581.1.gene798.p Protein 4e-67 61
CKR_1530 YP_002471995.1 hypothetical protein CP001581.1.gene598.p Protein 4e-59 55
CKR_1530 YP_002471995.1 hypothetical protein NC_012469.1.7686878. Protein 3e-42 45
CKR_1530 YP_002471995.1 hypothetical protein NC_008702.1.4606598. Protein 8e-36 43