Gene Information

Name : CKR_1486 (CKR_1486)
Accession : YP_002471951.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 1673205 - 1674911 bp
Length : 1707 bp
Strand : -
Note : homology (Evalue<1e-4) to COG0366 [G] Glycosidases

DNA sequence :
GTGATTAAAATGAAACAACTCTGGTGGAAAGAAGCAGTATTTTACGAGATATATGTAAGAAGTTTTATGGATTCTACAGG
GGATGGTATAGGGGATTTAAAAGGTATAATTTCAAAATTGGATTATTTAAAGGATTTAGGTATTGATGTGATATGGATTT
CTCCCATGTATAGATCCCCTAATTGTGATAATGGATATGATATCAGCGATTATAGGGATATTTTACCAGAGTTTGGAACA
TTGGATGATTTTTATGATCTTCTAAAACAGGTTCATGTGCGTGATATGAAGCTTATAATTGATTTAGTTATAAATCATAC
CAGTGATTTACATCCATGGTTTATTGAATCTAGAAGCTGCAGAAATAATTCAAAGAGGAATTTTTATATATGGAAGCAGG
GGATAAAAAATAAAGAACCTAATAATTGGAAAGGTATATTTGGAGGCTCTGTTTGGGAATATGACAGAAATACCAAGGAG
TATTATTTTCACTTGTTTTCTAAAAATCAACCGGATTTAAACTGGGAAAATGGGAAAATGCGTGAAGAAATATATGATAT
GATAAATTGGTGGCTTGAAAGAGGCGTAGACGGCTTTAGGATAGACGCCATAAGTCATATTAAGAAAGATGTGCTTGATA
AAAAAATGCCTTATGTTAAGGGCGAAAGGTATGTAGATGCCTTTGAGAGATATACTAACGTTCAAGGGATTTTTTATTAT
TTAAAGGAACTTAAAGAAAAGGCACTTAATAAATACGATATTGTTACTGTAGGGGAAGCAAATGGGGTTACTGTGGAACA
AGCGCCTCTCTGGGTAAATGAAAAAGATGGTATATTTAATATGATATTTCAATTTGAACTTTTGGATTTATTTGAATCAC
AGTCATATCATAAAATAAGTATATTAGATATAAAAAGAATTTTATCTAAGTGGCAGAAAGTACTGGAGAACAAAGGGTGG
AATGCACTATTTATAGAAAATCATGATGTACCTCGTATTGTTTCTATTCTAGGGGATAATGAGTATTTAAGAGAAAGTGC
TACCTGTATTGCAGCTATGTATTTTATGATGAAGGGTACTCCATTTATATATCAGGGACAAGAAATTGGTATGACCAATA
TAAAGCTAGAGGATATTGAAGAATATAACGATATAAAAAGCAAGGAATTCTATTGCACCAAGATAAAGGAGGGAGTACCT
AAAGAAAAGGTAATGAAAATATTAGGACTGTCCTCAAGAGATAATGCAAGAAGCCCCATGCAGTGGAATGATAAAAAGAA
TGCAGGTTTTACCACAGGTATTCCCTGGTTTAGTGTAAATGAAAATTATAAGAAAATTAATGTGGAAAATCAATTGAAGG
ATTCCAAGTCCATACTTAATTTTTATAAGAAAATGATTAGTATTAGAAGAGAAAATAAAGTTTTTATCTACGGAAATTAC
AAAATGATTTTAAAAGATCATATGAGTATATTTGCATATACAAGAACTTTTAAAGGTGAAAAGGCCATTGTAATATGTAA
TTTAAGTGTGGTTAATGCGTTATATAGATATGATACAATAAAATTAAATTATTCAAATTTTCTACTAGGTAATTATCCCA
TAGATAAAGAAAAATATGCTACAGAATTTGTATTAAAGCCTTATGAAACTAGAATTTATAAATTAAATTGTTTGGAGGAA
GATTCAGTTTGGAAGAAAAATATGTAA

Protein sequence :
MIKMKQLWWKEAVFYEIYVRSFMDSTGDGIGDLKGIISKLDYLKDLGIDVIWISPMYRSPNCDNGYDISDYRDILPEFGT
LDDFYDLLKQVHVRDMKLIIDLVINHTSDLHPWFIESRSCRNNSKRNFYIWKQGIKNKEPNNWKGIFGGSVWEYDRNTKE
YYFHLFSKNQPDLNWENGKMREEIYDMINWWLERGVDGFRIDAISHIKKDVLDKKMPYVKGERYVDAFERYTNVQGIFYY
LKELKEKALNKYDIVTVGEANGVTVEQAPLWVNEKDGIFNMIFQFELLDLFESQSYHKISILDIKRILSKWQKVLENKGW
NALFIENHDVPRIVSILGDNEYLRESATCIAAMYFMMKGTPFIYQGQEIGMTNIKLEDIEEYNDIKSKEFYCTKIKEGVP
KEKVMKILGLSSRDNARSPMQWNDKKNAGFTTGIPWFSVNENYKKINVENQLKDSKSILNFYKKMISIRRENKVFIYGNY
KMILKDHMSIFAYTRTFKGEKAIVICNLSVVNALYRYDTIKLNYSNFLLGNYPIDKEKYATEFVLKPYETRIYKLNCLEE
DSVWKKNM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 3e-120 46