|
Name : CKR_1365 (CKR_1365) Accession : YP_002471830.1 Strain : Clostridium kluyveri NBRC 12016 Genome accession: NC_011837 Putative virulence/resistance : Resistance Product : hypothetical protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1516281 - 1516985 bp Length : 705 bp Strand : + Note : homology (Evalue<1e-4) to COG0745 [TK] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain DNA sequence : TTGATTCTTGTAGTGGAAGATGATAAAGCCATCCGCAAGCTTATTACCACTACACTGGAAACACAAGGGTATCGATATCA TACTGCGGAAACGGGAGGGGCATCTATTTTAGAGGCAGTTTCTAGGCAGCCAGATATCATAATTTTGGATCTAGGGCTGC CTGATATGGATGGTGTTGAAATTATCAAAAAGGTGCGGACATGGTCTAATGTTCCCATTATTGTTGTCAGCGCTCGAAGT GAGGATAGGGATAAAATTGATTCCTTGGATGCTGGTGCAGATGATTATTTAACAAAGCCTTTCAGTGTTGAAGAGCTTTT AGCACGACTTCGGGTTAGTTTACGTCGTATTCGTTATGATAGTAAGAAGCTTCTAAAGGATGCTGCCATTTTTATAAATA GCGGTTTAAAAATTGACTATGAAGCCGGCTGTGTGTGGCTGGATGGAGATGAGGTACATCTTACCCCAATTGAATATAAA TTGATTTGTCTACTTGCTAAGAATGTGGGAAAGGTTCTGACACATAATTTTATTTTACATGAAATCTGGGGAAATTATTC AAATGATATTTCTGCTCTTCGTGTTTTTATGGCAACTCTTCGAAAAAAGATAGAAAAAGAGCCTTCAAAGCCCAAATACA TTCAAACTCACATTGGAATTGGCTATCGTATGCTGAGAGTTGTGGATGACAGCGAGATCATTTAA Protein sequence : MILVVEDDKAIRKLITTTLETQGYRYHTAETGGASILEAVSRQPDIIILDLGLPDMDGVEIIKKVRTWSNVPIIVVSARS EDRDKIDSLDAGADDYLTKPFSVEELLARLRVSLRRIRYDSKKLLKDAAIFINSGLKIDYEAGCVWLDGDEVHLTPIEYK LICLLAKNVGKVLTHNFILHEIWGNYSNDISALRVFMATLRKKIEKEPSKPKYIQTHIGIGYRMLRVVDDSEII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 2e-39 | 46 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 2e-39 | 46 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 2e-39 | 46 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 2e-39 | 46 |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 1e-40 | 46 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 2e-39 | 46 |
| EF0571 | NP_814337.1 | DNA-binding response regulator | Not tested | Not named | Protein | 3e-43 | 42 |
| ef0091 | AAM75294.1 | EF0091 | Not tested | Not named | Protein | 2e-43 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CKR_1365 | YP_002471830.1 | hypothetical protein | HE999704.1.gene2815. | Protein | 8e-33 | 41 |
