|
Name : CKR_1242 (CKR_1242) Accession : YP_002471707.1 Strain : Clostridium kluyveri NBRC 12016 Genome accession: NC_011837 Putative virulence/resistance : Resistance Product : hypothetical protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1382742 - 1383464 bp Length : 723 bp Strand : + Note : homology (Evalue<1e-4) to COG0745 [TK] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain DNA sequence : GTGAATTGTATAAAAGGGGTGCGATTTATGTCAAAAGAAAAAATATTAATAGTAGATGATGAAGAGCATATATGTGAACT TATTAAATTCAATCTTGAAAATAATGGATATAAAACTATCATAGCTTCAGAAGGAATGGAAGCACTAAAAATAGCAAAGG AGGAAAGACCAAAACTTATTTTGCTTGATGTCATGCTTCCGGGAATGGACGGGTATGATGTATGCAAAGAAATAAGAAAA GACGAGTCGATAGCCTCTACTCCTATAATGATGATAACTGCCAGAGGAGAAGAATTTGACAAGGTTCTGGGATTGGAACT TGGGGCGGATGACTATATTACAAAACCTTTTTCTGTAAGAGAATTATTGGCTAGGGTGAAAGCTATACTAAGAAGAACTG CTATAAAAACTTTAGATAAGTACTATGTGTTTGGAGACATAAGTATAGATTTTGACAGACATGAAGTGCTTAAAAATGGA GAAAAAGTAGAATTGACACTTAAGGAATTTGAACTTCTCCAGATGCTTATAAAAAATAAAGGCAGAGTTATGACCAGAGA TTTTCTGCTTGATAAGATATGGGGATATGAATATGTAGGGGAAACTAGAACTGTAGATGTTCATATAAGGCACATAAGAC AGAAGATAGAAAGCTGCGATAAAAAACCTAAATATATTGAAACCATACGTGGAATTGGCTATAGATTTAACTGGAAAGAG TAA Protein sequence : MNCIKGVRFMSKEKILIVDDEEHICELIKFNLENNGYKTIIASEGMEALKIAKEERPKLILLDVMLPGMDGYDVCKEIRK DESIASTPIMMITARGEEFDKVLGLELGADDYITKPFSVRELLARVKAILRRTAIKTLDKYYVFGDISIDFDRHEVLKNG EKVELTLKEFELLQMLIKNKGRVMTRDFLLDKIWGYEYVGETRTVDVHIRHIRQKIESCDKKPKYIETIRGIGYRFNWKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanRB | YP_001698483.1 | regulatory protein | Not tested | Not named | Protein | 3e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_002952.2859905.p0 | Protein | 5e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_002745.1124361.p0 | Protein | 6e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_009782.5559369.p0 | Protein | 6e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_002951.3237708.p0 | Protein | 6e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_002758.1121668.p0 | Protein | 6e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_009641.5332272.p0 | Protein | 6e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_013450.8614421.p0 | Protein | 6e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_007793.3914279.p0 | Protein | 6e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_003923.1003749.p0 | Protein | 6e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_007622.3794472.p0 | Protein | 5e-55 | 53 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_012469.1.7685629. | Protein | 8e-50 | 51 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | HE999704.1.gene2815. | Protein | 6e-52 | 51 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_012469.1.7686381. | Protein | 3e-51 | 50 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | AE016830.1.gene1681. | Protein | 5e-50 | 48 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | AE000516.2.gene3505. | Protein | 8e-43 | 44 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_003923.1003417.p0 | Protein | 1e-39 | 43 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_013450.8614146.p0 | Protein | 1e-39 | 43 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_002951.3238224.p0 | Protein | 1e-39 | 43 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_007793.3914065.p0 | Protein | 1e-39 | 43 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_002758.1121390.p0 | Protein | 1e-39 | 43 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_010079.5776364.p0 | Protein | 1e-39 | 43 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_002952.2859858.p0 | Protein | 1e-39 | 43 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_007622.3794948.p0 | Protein | 1e-39 | 43 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | HE999704.1.gene1202. | Protein | 3e-35 | 42 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | AE015929.1.gene1106. | Protein | 5e-35 | 42 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_014475.1.orf0.gen | Protein | 1e-36 | 41 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_005054.2598277.p0 | Protein | 1e-36 | 41 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | BAC0596 | Protein | 5e-34 | 41 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | BAC0039 | Protein | 2e-35 | 41 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | CP001138.1.gene2239. | Protein | 5e-34 | 41 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | CP000034.1.gene2186. | Protein | 2e-35 | 41 |
| CKR_1242 | YP_002471707.1 | hypothetical protein | NC_002695.1.916589.p | Protein | 2e-35 | 41 |
