Gene Information

Name : CKR_1183 (CKR_1183)
Accession : YP_002471648.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1324075 - 1324782 bp
Length : 708 bp
Strand : +
Note : homology (Evalue<1e-4) to COG1131 [Q] ABC-type multidrug transport system, ATPase component

DNA sequence :
ATGAATGATTTAATTTTAGAGACTAAAGAGCTTTGTAAAAATTTTAAAGGACAAATGGCGGTAAATAATGTATCGCTCAA
AGTCAGGCGCAATTCTATTTATGGATTGCTTGGACCAAATGGAGCGGGAAAGTCCACAACATTAAAGATGATAACTGGAA
TGCTGAGAGCAAGTAGTGGAAAAATTCTGTTTGAAGGTCATAAATGGAGTAGAAATGATTTAAAAAATATGGGAGCTTTA
ATTGAAGGAGCATCACTTTATGGAAATCTTACTGCAAGGGAAAATTTAAAGGTGCGTACAATAGTTTTAGGATTACCTGA
TAAAAGAATTGATGAAGTGCTTGAAATAGTGGATTTAAAGAATACAGGCAATAAAAGAGCGCATCAATTTTCTATGGGAA
TGAAGCAAAGGCTTGGAATTGCAATTGCACTTTTAAATAATCCAAAGCTTTTGATTTTAGATGAGCCCACTAATGGACTG
GATCCTTTTGGTATACAAGAACTTCGTGAATTAATTCGATCTTTTCCAAAGGAGGGTATTTCCGTAATACTATCAAGTCA
TATATTGAGTGAAGTTGAACAGGTAGCTTGCCAAATTGGGATTATCTCAGGTGGAATTTTAGGGTATCAGGGGGATATGA
AAAAGGGAGAAGATCTTGAAAAGTTGTTTATAGAGGTTGCAGGAAAATACAGAAGGGAGGGGGAATAG

Protein sequence :
MNDLILETKELCKNFKGQMAVNNVSLKVRRNSIYGLLGPNGAGKSTTLKMITGMLRASSGKILFEGHKWSRNDLKNMGAL
IEGASLYGNLTARENLKVRTIVLGLPDKRIDEVLEIVDLKNTGNKRAHQFSMGMKQRLGIAIALLNNPKLLILDEPTNGL
DPFGIQELRELIRSFPKEGISVILSSHILSEVEQVACQIGIISGGILGYQGDMKKGEDLEKLFIEVAGKYRREGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-47 50
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 6e-43 48
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 3e-40 46
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 3e-40 46
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 3e-40 46
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 3e-40 46
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 2e-31 46
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 6e-39 44
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 4e-39 44