Gene Information

Name : CKR_1138 (CKR_1138)
Accession : YP_002471603.1
Strain : Clostridium kluyveri NBRC 12016
Genome accession: NC_011837
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1279102 - 1279989 bp
Length : 888 bp
Strand : +
Note : homology (Evalue<1e-4) to COG0582 [L] Integrase

DNA sequence :
GTGATAATTTTGGAAAGCTTTTTACTGGGCTATGCAGAACAACTGGAAAAAAAACACATGAGTAAAAATACATTAGATGC
ATATATTAGGGATATAAATAGATTCTATAATTTTATAAAGAAGAGAGAAGGAAACTTAAAAGAAGTGGAAGTAGTGTCTA
TAATGGCATATGTACAGTATCTTCAAAAAGAAGGCAAGGCAATTTCATCCATAGTTAGAAATATAGTTTCTCTTAGAAAT
TTCTATAAATATCTAATGGTTAAGGGAGTAATAAACGAAAATCCTCTTTTGTACTATGAAATCCCTAAAGTAAAGCATAA
TATACCCAAAGTTCTAACTGTAGATGAGGTAGACAAGCTTCTTGATTCTCCAGATTCTACTACTTATAAAGGAATAAGGG
ATAAAGCTATGCTTGAAATAATGTACGCTGCAGGAATGAAAGTGATGGAACTTTTAACTTTAACCATATATGATATAGAT
TTAAAATTTTCATATATACGGTGTAAAAGTCTTAAGAACAAGGAAAGACTGGTACCTATAGGTTCTGTGGCAGTACAATA
TTTAAAAAATTATTTAGATATAAGACCTCAATTGAATATATACAATTTGGATACTTTGTTTTTGAATTTAAGAGGTGCAG
CCATGAGTCGCCAGGGATTTTGGAAAATTGTAAAATACTATGCAAAGGAATCTAAAATAGACAAGGATATAAATGCCTTT
ACTTTAAGACATTCTTTTGCAGTACATTTGCTTCAAAATGGTGCAGATATTAAATCTGTACAGGAACTTTTGGGACATAA
AGATTTATCCGCTACCCAGATATATTCTGCAGTACTAAAGAAGAATAAAATTGCAGAAGTATATAAAAAATCTCATCCAC
GGGCATAA

Protein sequence :
MIILESFLLGYAEQLEKKHMSKNTLDAYIRDINRFYNFIKKREGNLKEVEVVSIMAYVQYLQKEGKAISSIVRNIVSLRN
FYKYLMVKGVINENPLLYYEIPKVKHNIPKVLTVDEVDKLLDSPDSTTYKGIRDKAMLEIMYAAGMKVMELLTLTIYDID
LKFSYIRCKSLKNKERLVPIGSVAVQYLKNYLDIRPQLNIYNLDTLFLNLRGAAMSRQGFWKIVKYYAKESKIDKDINAF
TLRHSFAVHLLQNGADIKSVQELLGHKDLSATQIYSAVLKKNKIAEVYKKSHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 7e-48 41
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 7e-48 41