|
Name : clpB (BLA_0676) Accession : YP_002469545.1 Strain : Bifidobacterium animalis AD011 Genome accession: NC_011835 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 871976 - 874675 bp Length : 2700 bp Strand : - Note : COG0542: ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGAGGATGATATGGAACAGAAATATACGACTTTGGCTCAGGAGGCCTTGGGCGACGCGGTGCAGAGCGCCTCGGCCGC CGGCAACCCGCAGGTTGAGCCGCTGCATTTGCTTGACTCGCTGCTGCGTCAGGAGAACGGTGTCATCGGTGGTCTCATCG AGGCCGTGGGGGCGAACAGGCAGACGATCGGCGCGCAGGTGCGCAATGCCCTGGTCTCGCTGCCGAGCGCTTCCGGCTCG TCGACCGCGCAGGCTTCGGCCAGCCGCCAGCTGACCACCGCGTTGGCCGACGCCAGCAAGGAAATGAAGGACATGGGAGA TGAGTACATCTCCACCGAGCACCTGCTGCTGGGCATTCTCGACGCCGCCCCGAACGAGGCGGCCAAGATTCTCGAGCAGA ACGGCATCACGGCCGACAAGGTGCGCGCGGCCATCCCGAACGTGCGCGGTGGCGCCAAGGTGACGAGCCCGGACGCCGAG GCCTCGTACAAGGCGTTGGAGAAGTTCTCCACCGACCTGACGGCCCGTGCCCGTGAAGGCAAGCTCGACCCGGTGATCGG CAGGGATCAGGAGATCCGCCGTGTGATCCAGATTCTGAGCCGCCGCACGAAGAACAACCCGGTGCTGATCGGCGAGCCAG GCGTGGGCAAGACCGCCGTCGTGGAAGGCCTCGCCGAGCGCATCGTGGCCGGCGACGTGCCGAGCACACTGCAGAACAAG CGCCTCATCAGCCTCGACCTGGGCTCCATGGTGGCCGGGTCCAAGTACCGCGGCGAATTCGAGGAACGCCTCAAGGGCGT GCTTGACGAGATCAAGCAGTCCGACGGCCAGATCATCACCTTCATCGACGAGATCCATACGATCGTCGGTGCCGGTGCGG CCGAAGGCTCGATGGACGCGGGCAATATGCTCAAGCCTATGCTGGCCCGTGGCGAACTGCGCCTGATCGGCGCCACCACG CTCGACGAATACCGTGAGAACATCGAGAAGGATCCGGCCCTGGAGCGTCGTTTCCAGCAGGTGTTCGTGGGCGAGCCGAG TGTGGAGGACACGATCGCCATTCTGCGTGGCCTGAAGCAGCGCTATGAGGCCCACCACAAGGTGACGATCGGCGACGACG CGCTCGTGGCCGCCGCAACCCTCTCGAACCGCTACATCACCGGTCGTCAGCTGCCCGACAAGGCCATCGACCTGGTGGAC GAGGCCGCTGCGCACCTGCGCATGGAACTCGACTCGCAGCCCGAGGAGATCGACGAGCTGCAGCGCAAGGTGACGCGCCT CGAAATGGAGGAGATGCAGCTGAAGAAGGCCGAGGACCCGGCCTCCAAGGAGCGCCTCGCCAAGCTCCAGAGCGAACTGG CCGACGCCCGCGAGAAGCTCGCAGGACTCAACGCCCGTTGGAACGCCGAGAAGGAAGGCCACAACAAGGTCGGCGACCTG CGTGCGCAGCTCGACGAGAAGCGCGTCGAGGCCGACAAGGCCACGCGTGAAGGCGACCTGGCGAAGGCGAGCCGCATTCT GTACGGTGAGATCCCGGCCATTCAGAAGCAGCTGACCGAAGCCGAGCACGAGGCCGAGAAGGAAGCCGACTTCGCCCATG AGGATGAGCCCATGGTCCCCGACCATGTGGACGCCGATTCGGTGGCCGGCATCGTCTCCGAATGGACCGGCATTCCGGTC GGCCGTCTCATGCAGGGCGAGAACGAGAAACTGCTCAACATGGAGGAATACCTCAACAGGCGCGTGATCGGCCAGCCGGA AGCCGTTCGTGCGGTCTCCGACGCCGTGCGCCGTTCGCGTGCAGGCCTGTCCGACCCGAATCGCCCGACCGGTTCGTTCC TGTTCATGGGCCCGACCGGCGTGGGCAAGACCGAGCTCGCCAAGGCGCTCGCCGAATTCCTGTTCGACGACGAGAAGGCC ATGATCCGCATCGACATGTCGGAGTACATGGAGAAGTCGTCGGTCTCGCGTCTCATCGGCGCAGCCCCGGGCTATGTCGG TTACGAGGAGGGCGGCCAGCTCACCGAGGCCGTGCGTCGTCGTCCGTATTCGGTGGTGCTGTTCGACGAGGTGGAGAAGG CCAATTCCGAGGTCTTCGACATTCTGCTGCAGGTGCTCGATGACGGCCGCCTGACCGATGGTCAGGGCCGCACCGTGGAC TTCAAGAACACGATCCTGATCATGACGTCGAACCTCGGCTCGCAGTTCCTGGTCAACCCCGACCTGGATGAGCAGCAGAA GAAGGACGCCGTGATGAACGCGGTGCACAGCCAGTTCCGTCCGGAGTTCCTCAACCGTCTCGACGACATGGTGATCTTCC ACCCGCTCACACGCCAGGAGCTCGGCAAGATCGTCGACCTGCAGGTCAAGCAGGTGGCTTCGCGCCTCACCGACCGTCGC ATCACGCTCGACGTCACCGAAGCGGCACGCGAATGGCTTGCCGACACCGGCTACGACCCGGCATACGGTGCGCGTCCGCT GCGCCGTCTGGTGCAGACCGAGGTGGGCGACCAGCTGGCACGCATGCTGCTCGCCGGCGAGATCAAGGACGGTGACACCG TGCTGGTGGACCACACCGGTGGCGAGCACCTCGAGCTCACCGACCATACGCACAACCCGATGGAAGGCGACCCGAACCCT GGAGACTCCCAGATCACGGTTGACGACAAGAAGGATGACGGCGAACAGAAGGACGCCTGA Protein sequence : MEDDMEQKYTTLAQEALGDAVQSASAAGNPQVEPLHLLDSLLRQENGVIGGLIEAVGANRQTIGAQVRNALVSLPSASGS STAQASASRQLTTALADASKEMKDMGDEYISTEHLLLGILDAAPNEAAKILEQNGITADKVRAAIPNVRGGAKVTSPDAE ASYKALEKFSTDLTARAREGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAERIVAGDVPSTLQNK RLISLDLGSMVAGSKYRGEFEERLKGVLDEIKQSDGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATT LDEYRENIEKDPALERRFQQVFVGEPSVEDTIAILRGLKQRYEAHHKVTIGDDALVAAATLSNRYITGRQLPDKAIDLVD EAAAHLRMELDSQPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLAKLQSELADAREKLAGLNARWNAEKEGHNKVGDL RAQLDEKRVEADKATREGDLAKASRILYGEIPAIQKQLTEAEHEAEKEADFAHEDEPMVPDHVDADSVAGIVSEWTGIPV GRLMQGENEKLLNMEEYLNRRVIGQPEAVRAVSDAVRRSRAGLSDPNRPTGSFLFMGPTGVGKTELAKALAEFLFDDEKA MIRIDMSEYMEKSSVSRLIGAAPGYVGYEEGGQLTEAVRRRPYSVVLFDEVEKANSEVFDILLQVLDDGRLTDGQGRTVD FKNTILIMTSNLGSQFLVNPDLDEQQKKDAVMNAVHSQFRPEFLNRLDDMVIFHPLTRQELGKIVDLQVKQVASRLTDRR ITLDVTEAAREWLADTGYDPAYGARPLRRLVQTEVGDQLARMLLAGEIKDGDTVLVDHTGGEHLELTDHTHNPMEGDPNP GDSQITVDDKKDDGEQKDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 5e-164 | 46 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-109 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 3e-110 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-110 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002469545.1 | ATP-dependent chaperone ClpB | VFG2084 | Protein | 1e-112 | 44 |
| clpB | YP_002469545.1 | ATP-dependent chaperone ClpB | VFG2076 | Protein | 3e-121 | 42 |
