Gene Information

Name : dnaB (BUAP5A_539)
Accession : YP_002468277.1
Strain : Buchnera aphidicola 5A
Genome accession: NC_011833
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 583500 - 584897 bp
Length : 1398 bp
Strand : +
Note : primary replicative DNA helicase

DNA sequence :
ATGGTATATGCAATAAATATGGCTAAAGATAAATTATATTTAAATCAAATTAACAGATTAAAAATCCCACCACATTCTTT
AGAAGCAGAACAATCGGTATTGGGTGGGTTGATGTTAGATAATGAACAATGGGATAGCGTTTCAGAACATGTAGTTGCTG
ATGATTTTTTTAGTAAACCCCATCGCTTGATCTTCCAAGAAATGCAAAAACTTCTCGATCTAGGATATCCAATAGATTTA
ATTACTCTATCTGAATCTTTAGAACAAAAAGGAAAATTAGAAAGTGTAGGAAGATTTTCTTATCTAGCTGAACTTTCAAA
AAACACTCCTAGCACTGCAAATATTACTGCATATGCTGATATAGTAAGAGAGCGCGCAATAGTAAGAGAAATGATATTAG
TAGCAAATAAAATAGCTAATGCTGGATATGATACACAAGGACGAAAAAGTGAAGAATTATTAGATTACGCAGAATCAAGT
GTCTTTAAAATTGCAGAAAAACGTTTCAAAAAAGACTCAGGACCAAAAAATGTTGAACAAATTCTTGATGAAACTGTTGC
TAGTATTGAAAAATTATTTCTATCACCTCATGACGGCGTGACGGGAATTAATACAGGATATCAAGATTTAAATAAAAAAA
CATCAGGATTACAGCGTTCTGAACTTATCATTATTGCAGCAAGACCCTCCATGGGAAAAACAACATTTGCAATGAATTTA
TGTGAAAATGCTGCTATGCTTTATGATAAACCTGTATTAATATTTAGTTTAGAAATGCCTGGAGAACAAATTATGATGCG
TATGTTAGCATCTTTATCTAGAGTCAATCAAGCACGAATTAGGACTGGACAATTAAACAACGAAGATTGGGCGCGTATTT
CTGGGACTATTAATATTCTTCTTAAGAAAAAGAATATCTATATTGATGACTCATCAGCATTAACTCCAAGTGAAGTCCGT
TCAAGAGCTCGTCGTATTTATCGTGAAAATAATGGATTAACTTTAATTATGGTGGACTATTTACAATTAATGAGAGTCCC
TTCTTTATCCGAAAACCGTACTCTTGAAATTGCAGAAATATCTAGAACATTGAAAGCATTGGCAAAAGAACTACAGGTTC
CAGTAATAGCATTATCACAACTTAACCGATCTTTAGAACAAAGATCTGATAAAAGACCAGTAAATTCAGATTTACGTGAA
TCAGGATCTTTAGAACAAGATGCAGACTTAATAATGTTTATATATCGCGATGAAATTTATAATGAAAATAGTGACTTGAA
AGGGATAGCAGAAATTATAATAGGAAAACAGAGGAATGGACCAATTGGAACAGTTCGTCTAACTTTTAATGGACATTGGT
CTCGATTTGACAACTATTCTGGTCAAAAATATGATTAA

Protein sequence :
MVYAINMAKDKLYLNQINRLKIPPHSLEAEQSVLGGLMLDNEQWDSVSEHVVADDFFSKPHRLIFQEMQKLLDLGYPIDL
ITLSESLEQKGKLESVGRFSYLAELSKNTPSTANITAYADIVRERAIVREMILVANKIANAGYDTQGRKSEELLDYAESS
VFKIAEKRFKKDSGPKNVEQILDETVASIEKLFLSPHDGVTGINTGYQDLNKKTSGLQRSELIIIAARPSMGKTTFAMNL
CENAAMLYDKPVLIFSLEMPGEQIMMRMLASLSRVNQARIRTGQLNNEDWARISGTINILLKKKNIYIDDSSALTPSEVR
SRARRIYRENNGLTLIMVDYLQLMRVPSLSENRTLEIAEISRTLKALAKELQVPVIALSQLNRSLEQRSDKRPVNSDLRE
SGSLEQDADLIMFIYRDEIYNENSDLKGIAEIIIGKQRNGPIGTVRLTFNGHWSRFDNYSGQKYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 5e-95 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-97 52
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 5e-97 51
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 7e-97 51
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-93 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 8e-85 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 8e-85 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 7e-79 47
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 9e-72 42