Gene Information

Name : Mpal_0270 (Mpal_0270)
Accession : YP_002465376.1
Strain : Methanosphaerula palustris E1-9c
Genome accession: NC_011832
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 301477 - 302163 bp
Length : 687 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mhu:Mhun_2931 ABC transporter related

DNA sequence :
ATGAGTGAGGCAATGGCTGAGACCCCGCTGATCACATTCAGCGAGGTCAGCAAGGTGTACAAGCTCCCTGCCGGAGATGT
GATCGCCCTCGATCACATCTCCCTTAAGATCATGAAGGGAGAGTTCGTCGCGATCATGGGTCCCTCGGGATCAGGAAAGT
CGACGACGATGAACATGATCGGGTGCCTCGACACCCCTACATCGGGTGATCTGATGATCAATGGGATCAACACCAAGGAG
ATGAGCGATCGTGCACTGACGAGCCTCAGGCGGGATACGATCGGGTTCATCTTCCAGCAGTTCAACCTGATCCCCTCGCT
GACGATCCTGGAGAATGTCGAGTTCCCCCTGCTGATGAAGTACGGGGGAAACATTCCACAAGGACGAGCAGAACAGGCAC
TGGCTACAGCAGGACTCGATCCGAAGCTGTACACCCATACCCCGGCAGAACTCTCCGGCGGGCAGCAGCAGCGGGCGGCG
ATCGCTCGCTCCCTCGTTAATGACCCGGTCCTCCTTCTCTGCGACGAGCCGACCGGGAATCTGGACAGAAAGACAGGAAT
GGGGATCATGAAGCAGTTGGCAGATATGAACAGCGAAGGGACGACCGTCATCATGGTCACCCATGACCCCACCACTGCCG
AGTATGCAGACCGGACGATCATGATCGAGGATGGTCGGATCGTATGA

Protein sequence :
MSEAMAETPLITFSEVSKVYKLPAGDVIALDHISLKIMKGEFVAIMGPSGSGKSTTMNMIGCLDTPTSGDLMINGINTKE
MSDRALTSLRRDTIGFIFQQFNLIPSLTILENVEFPLLMKYGGNIPQGRAEQALATAGLDPKLYTHTPAELSGGQQQRAA
IARSLVNDPVLLLCDEPTGNLDRKTGMGIMKQLADMNSEGTTVIMVTHDPTTAEYADRTIMIEDGRIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-33 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpal_0270 YP_002465376.1 ABC transporter NC_012469.1.7686878. Protein 4e-47 50
Mpal_0270 YP_002465376.1 ABC transporter CP001581.1.gene798.p Protein 8e-39 46
Mpal_0270 YP_002465376.1 ABC transporter NC_008702.1.4606598. Protein 3e-41 46
Mpal_0270 YP_002465376.1 ABC transporter CP001581.1.gene598.p Protein 1e-36 43
Mpal_0270 YP_002465376.1 ABC transporter NC_012469.1.7685735. Protein 8e-37 42