Gene Information

Name : Mpal_2228 (Mpal_2228)
Accession : YP_002467244.1
Strain : Methanosphaerula palustris E1-9c
Genome accession: NC_011832
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2378714 - 2379610 bp
Length : 897 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGAAGCTCGAGGAACTGAGGTTCGGCACCGAGCTGCTGAAGCGCGGATTCGCGTCCATGCAGAAGGGTGGTGTGATCAT
GGATGTGGTCAACGCAGATCAGGCGCGGATCGCTGAGGAAGCGGGGGCTGTCGCTGTGATGGCCCTTGAGCGGGTACCGG
CAGAGATCAGAAAAGCCGGTGGGGTGGCCAGGATGGCGGACCCAGATCGTGTGACCGGAATCATCGATGCGGTCAGCATC
CCGGTGATGGGTAAGGTCAGGATCGGTCACTTTATCGAGGCCCGGGTGCTCGAATCGCTTGGGGTCGATATGATTGATGA
GAGCGAGGTACTGACACCTGCTGATGAAGAATATCATATTCGGAAGACTGAATTTGATGTTCCATTCGTCTGCGGTGCGC
GGAATCTCGGCGAGGCTCTCCGTCGGATCGATGAAGGCGCAGCCATGATCCGGACCAAGGGCGAGGCTGGCACCGGCAAC
GTCGTCGAGGCCGTCAGGCACATGCATGCGATCATGGGCGAGATCCGGCAGCTCAAAGGGCTCGACCGACAGGAGCTGAT
CGACCGGGCCCGGTCGATCGAGGCGCCGACAGCCCTCGTCATCGAGTGTGCTGAGCGGGGAAGACTTCCGGTCGTGAACT
TCTCGGCTGGTGGGATAGCGACCCCCTCGGATGCGGCCCTGATGATGCACCTCGGTGCAGACGGTGTATTTGTCGGTTCA
GGAATTTTCCTCTCCAGCAACCCGGCCCGAACGGCCAAGGCTGTCGTCGAGGCGGTCAACCACTACCAGGAGCCGGCTGT
GATCGCTGAGGTCTCCCGCGGGCTTGGCGAGGCGATGAAGGGGATCGATGTTCATACTCTCAAGGACGACGAGGTGCTCC
AGTTCCGTGGACGTTAA

Protein sequence :
MKLEELRFGTELLKRGFASMQKGGVIMDVVNADQARIAEEAGAVAVMALERVPAEIRKAGGVARMADPDRVTGIIDAVSI
PVMGKVRIGHFIEARVLESLGVDMIDESEVLTPADEEYHIRKTEFDVPFVCGARNLGEALRRIDEGAAMIRTKGEAGTGN
VVEAVRHMHAIMGEIRQLKGLDRQELIDRARSIEAPTALVIECAERGRLPVVNFSAGGIATPSDAALMMHLGADGVFVGS
GIFLSSNPARTAKAVVEAVNHYQEPAVIAEVSRGLGEAMKGIDVHTLKDDEVLQFRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-85 67
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 4e-85 67
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-85 66