Gene Information

Name : Mpal_2132 (Mpal_2132)
Accession : YP_002467153.1
Strain : Methanosphaerula palustris E1-9c
Genome accession: NC_011832
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase/dehydratase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 2264197 - 2265111 bp
Length : 915 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mem:Memar_0700 NAD-

DNA sequence : 
ATGAAAGTCGTCGTTACCGGTGGAGCGGGTTTTATCGGCTCGAACCTTGCTGAGGAACTGAGCAAAAAGCATCAGGTGAT
CGTGCTCGATGATCTCTCAACTGGACGAGAGATAAATCTCAAGGGGCTCGACGTCGAGTTTATAAAAGGGAGCATCACCG
ATCTTTCCCTGGTGAACCGGGTCTTTTCCGGGGTTGACTATGTCTTTCACGAGGCCGCCCTTCCTTCGGTGCAGCGATCA
GTCGAGAATCCGGTCGCGACCAACGAGGTGAACATCGGTGGAACTCTGAACGTGCTGATGGCCGCACGCGACCAGGGGGT
CAAGAAGATCATGTTCGCCTCTTCGTCGTCGGTGTACGGAGATACTCCGACGCTGCCCAAGCGCGAGAGTATGACCCCGG
CGCCGATGTCTCCGTACGCGGTCACCAAATTGACCGGGGAGCACTATTTCAATGTTTTCTCGTCACTGTACGGGTTGAAG
ATGACCTGCCTGCGCTACTTCAATGTCTTTGGTCCAAGGCAGGATCCCAAGTCGCAGTACGCTGCGGTGATACCGAACTT
TATTACGAAGATCCTGAACCATGAATCTCCGATCATCCATGGTGATGGGGAGCAGACCCGGGATTTCACCTTCATTCGGG
ACGTGGTTCATGCCAATATCCTTGCGATGGAGTCCTCGAGTGAGGGGATCTTCAATATCGCCTGTGATCGGCGGGTCAGC
CTGAATGTGCTGGCCGACCAGATCATGGAGATCATCGGCGAACGCCGCGAACTGATCTATGATGCACCCAGATCCGGGGA
TGTACGGGATTCTCTGGCAGATTACACCCTGGCCAAAGAGCACCTTAATTATGAACCCGGGTTCACCTTACTACAGGGAT
TAGAAGAGACGATACAATGGTTCAGAAATCAGTAA

Protein sequence : 
MKVVVTGGAGFIGSNLAEELSKKHQVIVLDDLSTGREINLKGLDVEFIKGSITDLSLVNRVFSGVDYVFHEAALPSVQRS
VENPVATNEVNIGGTLNVLMAARDQGVKKIMFASSSSVYGDTPTLPKRESMTPAPMSPYAVTKLTGEHYFNVFSSLYGLK
MTCLRYFNVFGPRQDPKSQYAAVIPNFITKILNHESPIIHGDGEQTRDFTFIRDVVHANILAMESSSEGIFNIACDRRVS
LNVLADQIMEIIGERRELIYDAPRSGDVRDSLADYTLAKEHLNYEPGFTLLQGLEETIQWFRNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-51 44
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-51 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpal_2132 YP_002467153.1 NAD-dependent epimerase/dehydratase VFG0430 Protein 5e-52 44