Gene Information

Name : Mpal_1252 (Mpal_1252)
Accession : YP_002466310.1
Strain : Methanosphaerula palustris E1-9c
Genome accession: NC_011832
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1280085 - 1280789 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mem:Memar_0493 ABC transporter-related protein

DNA sequence :
GTGAACGCGCTTCAACCCTCTGATGAACGATCAGATCAACCGGTCCTCCTCTTCGATCAGGTGACCAAGATCTATCCCCT
CCCAGCAGGGGATGTGGTGGCACTCGATCACGTCTCGCTGAAGGTCTACCCGGGCGAGTTCATCGCGATCATGGGCCCCT
CTGGATCAGGCAAGACCACGCTGTTGAACATGATGGGATGCCTCGATATCCCAACATCAGGGGACCTGATCATCAACGGT
TCAAATGTTAAGGACCTGAGTGATGACGAACTCACCTGGCTGCGACGGGACACGATCGGGTTCATCTTCCAGCACTTCAA
CCTGATCCCACTCCTCTCGGTCTTGGAGAATGTGGAGTTTCCGCTGATCCTGAAATGTCAGAACGATGAATGCGGCCTCA
AGCCGCTGGAGGTATTGAAGGCCGCAGGGCTCGATGATGTCCAGCTCTATACACACAAGCCGAGTGAACTCTCAGGCGGA
CAGCAGCAGCGGGTTGCGATCGCACGGGCGCTGGTCAACGACCCCGACATCCTCCTCTGCGATGAGCCTACCGGCAACCT
GGACTCCAAGACAGGGAAGGGTATCATGGACCTGTTGACCACGATGAACCAGGACGGAAAGACCATCATCATGGTCACGC
ACGATGCATCGGTTGCCGACTATGCCAGTCGGATGATCCGGATCGTGGACGGGAGAATTGCATGA

Protein sequence :
MNALQPSDERSDQPVLLFDQVTKIYPLPAGDVVALDHVSLKVYPGEFIAIMGPSGSGKTTLLNMMGCLDIPTSGDLIING
SNVKDLSDDELTWLRRDTIGFIFQHFNLIPLLSVLENVEFPLILKCQNDECGLKPLEVLKAAGLDDVQLYTHKPSELSGG
QQQRVAIARALVNDPDILLCDEPTGNLDSKTGKGIMDLLTTMNQDGKTIIMVTHDASVADYASRMIRIVDGRIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-32 44
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-27 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpal_1252 YP_002466310.1 ABC transporter NC_012469.1.7686878. Protein 2e-45 51
Mpal_1252 YP_002466310.1 ABC transporter CP001581.1.gene798.p Protein 6e-40 48
Mpal_1252 YP_002466310.1 ABC transporter CP001581.1.gene598.p Protein 8e-42 46
Mpal_1252 YP_002466310.1 ABC transporter NC_008702.1.4606598. Protein 3e-39 46
Mpal_1252 YP_002466310.1 ABC transporter NC_012469.1.7685735. Protein 1e-34 42