Gene Information

Name : Cagg_3554 (Cagg_3554)
Accession : YP_002464828.1
Strain : Chloroflexus aggregans DSM 9485
Genome accession: NC_011831
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 4317532 - 4318311 bp
Length : 780 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cau:Caur_0196 ABC transporter related

DNA sequence : 
ATGACGCCCTTAGCAGTTGAGATAGAGGATTTAACCGTTGCCTACGGTGATAAGCCGGTGTTGTGGGATATCGATCTAGA
GGTGCCGCGCGGTGTGTTAATGGCGATTGTCGGCCCAAACGGGGCCGGTAAGACAACGCTGCTCAAAGCGACTCTCGGGC
TGATTACACCGGCCGCGGGCAGTGTCCGCATTTTTGGCCAACCGTACCAGCGCCAACGTCATCTCGTTGCTTATGTTCCG
CAGCGAAGCAGTGTCGATTGGGATTTTCCGACCACCGTACTTGATGTTGTGTTGATGGGGCGGTACGGTCAGCTTGGGTG
GCTACGCCGACCTGGTCGCGCCGACCGCGAGGTGGCGATGGCCGCACTCGAGCAGGTTCAGCTGGCCGATCTTGCCGGTC
GCCAGATCGGCCAGCTATCCGGCGGACAGCAGCAACGAGTGTTTGTAGCCCGCGCCTTGGCCCAAGATGCCGATATCTAT
TTTATGGATGAACCGTTTCAAGGGGTTGATGCCGTCACCGAACGGTCGATCATCACCGTGTTACGCCATTTGCGTAACGC
CGGGAAGACGGTGATCGTCGTTCATCATGATCTACAAACCGTTCCTGAATATTTTGACTATGTAGCGCTGATCAATGTGC
GTAACATCGCAACTGGGCCGGTACGTGAAGTCTTTACCGAAGCGAATCTTCGAGCGACGTATGGTGGGCGGGTTGCAGTT
CTGGAGAAGGGTGCAGTGTCGGGTGGTGGACTTGCGCCAACTCCAGTACAGGGAGATTAA

Protein sequence : 
MTPLAVEIEDLTVAYGDKPVLWDIDLEVPRGVLMAIVGPNGAGKTTLLKATLGLITPAAGSVRIFGQPYQRQRHLVAYVP
QRSSVDWDFPTTVLDVVLMGRYGQLGWLRRPGRADREVAMAALEQVQLADLAGRQIGQLSGGQQQRVFVARALAQDADIY
FMDEPFQGVDAVTERSIITVLRHLRNAGKTVIVVHHDLQTVPEYFDYVALINVRNIATGPVREVFTEANLRATYGGRVAV
LEKGAVSGGGLAPTPVQGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-39 46
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 1e-39 46
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-45 46
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-45 46
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-46 46
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-46 46
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-46 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cagg_3554 YP_002464828.1 ABC transporter-like protein BAC0400 Protein 4e-67 63
Cagg_3554 YP_002464828.1 ABC transporter-like protein BAC0350 Protein 1e-46 46
Cagg_3554 YP_002464828.1 ABC transporter-like protein BAC0440 Protein 3e-43 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cagg_3554 YP_002464828.1 ABC transporter-like protein VFG0526 Protein 1e-46 46