Gene Information

Name : Cagg_2936 (Cagg_2936)
Accession : YP_002464232.1
Strain : Chloroflexus aggregans DSM 9485
Genome accession: NC_011831
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 3599855 - 3600736 bp
Length : 882 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGAAAAATCGACGTGGACGACGAAGGTTGGGCTTGCGCAAATGCTTAAAGGTGGCGTCATTATGGATGTGGTGACGCC
TGAGCAAGCACGGATCGCTGAAGAGGCCGGTGCAGTGGCGGTGATGGCGCTTGAACGGGTACCGGCCGATATTCGCGCTC
AAGGTGGTGTTGCACGGATGAGCGATCCAGAGCTGATCTTGGCGATCAAACAGGCTGTAACCATCCCGGTCATGGCAAAA
GCGCGGATCGGCCACTTCGTCGAGGCACAGGTGCTAGAGGCAATCGGTGTCGACTACATCGACGAGAGTGAGGTCTTGAC
GCCAGCCGACGAAGAGCATCATATTAACAAGCATAAGTTCCGAGTGCCGTTCGTATGCGGCTGCCGCAATTTGGGTGAGG
CCCTGCGCCGAATTGCCGAGGGTGCGGCGATGCTGCGTACCAAAGGCGAGGCCGGTACCGGTAATGTCGTGGAGGCAGTT
CGTCATGCACGCGCTGTGTACAGTGAAATTCGCCGCTTGCAGTCGATGAACGAAGACGAACTGTTTACTTACGCCAAACA
GATCCAAGCACCGTATGAGTTGGTCAAGCAAGTAGCTACGGAAGGCAAGCTGCCGGTCGTCAATTTTGCTGCCGGTGGGA
TTGCCACTCCGGCTGATGCTGCCCTGTTGATGCAGCTTGGTGTGGATGGTATCTTTGTCGGGTCCGGTATTTTCAAGAGT
GGTAACCCGATCAAGCGCGCACGCGCCATTGTGGAAGCAACGACCCACTACAACGATCCGGAAATCATCGCTGAGGTGAG
TAAAGGCCTCGGCGAGGCTATGGTTGGGATTAACATCGATCAGATTCCCGCTGAGCAGTTGATGGCTCGGCGTGGATGGT
AG

Protein sequence :
MEKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAK
ARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRIAEGAAMLRTKGEAGTGNVVEAV
RHARAVYSEIRRLQSMNEDELFTYAKQIQAPYELVKQVATEGKLPVVNFAAGGIATPADAALLMQLGVDGIFVGSGIFKS
GNPIKRARAIVEATTHYNDPEIIAEVSKGLGEAMVGINIDQIPAEQLMARRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-93 74
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-93 74
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-93 74