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Name : Cagg_1997 (Cagg_1997) Accession : YP_002463321.1 Strain : Chloroflexus aggregans DSM 9485 Genome accession: NC_011831 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2441979 - 2443931 bp Length : 1953 bp Strand : - Note : PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: DNA sequence : TTGAAGCTCGAATTATCCTCACCAACCCGCAATCGTTATTTTTTCTTGCTTGATACGATCTTGTTACCTATTGCCGCCTA CTTGAGCTTTGTGGTACGTCTTGACGAATTACCGTCAGGCGCAGCACTTATGGGTTGGTTTATACTGGCAGCGCTTGCCA CACCGATCCACCTCTTTGTCTTTCGACAATTGGGTGTCTATGCACGCTATTGGCGCTACGCTTCCCTTGACGAACTACTA TTGCTTATTTCGGCGGTGTCACTCGCTATGATCATCGCCGCACCAACCACGTTCATCGTTGCCGGTATCATACCAATGGC TCTCCTCCCGCGGTCGGTACCGGTTATCTTCTTCTGTTTTAACCTCGTTATGACGATTGGGCCACGCCTGTTATCACGCC TGCACTGGCACCATCAGCTAATGCAGCGCAAGCGTAAGGGTGAAATCAACGGTAAGCAGCAACGAGTGTTGATTATGGGT GCCGGCTCGGCTGGTACGATGATCGCGCGTGAATTGCGTGATAATCCGCAACTTGGTATGGTAGCGGTTGGGTTTCTCGA TGATGACCCGCTTAAGTTCGGTATGTGCATCTATGGCATACCGGTACTCGGAAATCGCTTCGACATACCGCGCCTGGCCC GTGAATATAGTGCGCATCTGGTCATCATCGCGATGCCTTCGGCCACCGGCAAAGAGATTCGTAGCATTGTCGAACTCTGT GAGCGAACCGGGGTCAAAACCAAAATTATGCCCGGTCTCTACGAAATGCTCGACGGGAAGGTTAGCGTTAATCAATTGCG TAACGTGCAGATTGAAGACCTATTGCGTCGGAAACCGGTGCAGACCGACATTGTCGCCGTCCATAATCTGTTGCGTGGCA AGCGCGTGATGGTGACCGGTGGGGGTGGCTCGATCGGTTCCGAACTCTGCCGTCAGATCCTGCGCGCCGAGCCGGCCGAG TTGATAATCCTCGGTCACGGCGAAAACTCGGTGTTTACCATCGAACAGGAGCTACGCCGGCAAGTAACGTCTGCTACCCG TCTCACTACGATCATCGCCGATATTCGCTTTGCCGAGCGTGTTATGCATATCTTTGAACAATACCAACCCGAGATCGTTT TTCACGCGGCAGCGCACAAGCACGTGCCGTTGATGGAATTGCATCCGTCTGAAGCGGTGACCAATAACGTACTCGGGACG CGCAATCTCCTGAGCGCGGCAATGCAGGTTAACGTGAGCCACTTTGTGATGATCTCGAGCGACAAAGCTGTTAATCCCAC CAGTGTGATGGGGGCCACGAAACGGGTAGCCGAGCTGCTGGTTCACGAAGCGGCCCGATTAACCGGACGAGCATACGTCG CAGTACGTTTCGGTAATGTGCTCGGTTCACGCGGATCGGTCGTATTGACGTTCAAGCAGCAGATCGCCGCCGGTGGTCCG GTCACCGTTACCCATCCGGAGATGCGCCGGTTCTTTATGACCATCCCTGAAGCGGTGCAATTGACACTCCAAGCCTCGGT GTTGGGGAAGGGCGGCGAAGTGTTTGTCCTCGATATGGGTGAACCGATCCGCATCGTCGATCTCGCGCGCGATATGATCG AGTTGTCCGGTTTACAGGTCGGACGCGATATTGATATCGTCTTTACCGGCCTCCGTCCCGGCGAGAAGCTGTACGAAGAG CTGTTTATCGAGGGGGAAGAATATCAGCGCACCGAGCACGCCAAAATCTTTATCGCACGCAACGCTTCACAGTTTGTCCC TCGCGCACTCGCCGATCAGATCCGTATCCTTGAGATGGCAGCCTTTCATGAAGATACGGCCTTGCTCCTCCGTACCTTGC ATCGGCTCGTTCCGACCTTCAAACAACCGATGCCACTACCGATGACTGAACCCAAGCCGCGCGAACAGGCTGTGGGTGAA CCGCTGTGGAAACGACAGATGGCAAGCGATTAA Protein sequence : MKLELSSPTRNRYFFLLDTILLPIAAYLSFVVRLDELPSGAALMGWFILAALATPIHLFVFRQLGVYARYWRYASLDELL LLISAVSLAMIIAAPTTFIVAGIIPMALLPRSVPVIFFCFNLVMTIGPRLLSRLHWHHQLMQRKRKGEINGKQQRVLIMG AGSAGTMIARELRDNPQLGMVAVGFLDDDPLKFGMCIYGIPVLGNRFDIPRLAREYSAHLVIIAMPSATGKEIRSIVELC ERTGVKTKIMPGLYEMLDGKVSVNQLRNVQIEDLLRRKPVQTDIVAVHNLLRGKRVMVTGGGGSIGSELCRQILRAEPAE LIILGHGENSVFTIEQELRRQVTSATRLTTIIADIRFAERVMHIFEQYQPEIVFHAAAHKHVPLMELHPSEAVTNNVLGT RNLLSAAMQVNVSHFVMISSDKAVNPTSVMGATKRVAELLVHEAARLTGRAYVAVRFGNVLGSRGSVVLTFKQQIAAGGP VTVTHPEMRRFFMTIPEAVQLTLQASVLGKGGEVFVLDMGEPIRIVDLARDMIELSGLQVGRDIDIVFTGLRPGEKLYEE LFIEGEEYQRTEHAKIFIARNASQFVPRALADQIRILEMAAFHEDTALLLRTLHRLVPTFKQPMPLPMTEPKPREQAVGE PLWKRQMASD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 9e-98 | 43 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-93 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Cagg_1997 | YP_002463321.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-93 | 45 |
| Cagg_1997 | YP_002463321.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 1e-80 | 42 |
