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Name : Dhaf_0008 (Dhaf_0008) Accession : YP_002456514.1 Strain : Desulfitobacterium hafniense DCB-2 Genome accession: NC_011830 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 9478 - 10743 bp Length : 1266 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTAGATCTCAAATTTGTACGCACGAACCCCGAAGTAGTCAAGGAAGCCCTTAAAAAAAGAAATTCCAATGTCAGTTT GGATGCTTTTCTGGAACAAGAAGAAGAGCGCCGCAAGCTTCTTTTTGAAGTGGAATCATTAAAAGCCCAGCGAAACACGG TCTCTGAAGAGGTAGGGCGCCGGAAAAAACATGGGGAAGATGCGGAGCAGCTTATTTTAGAGATGCGGGAAGTGGGACAA AAAGTTAAGAATCTCGAAGATAAATTAGGTGAGATTGAGCAGAGCATGGAAGCTGTGCTTTATGAGATTCCTAATATTCC TCATGAATCAGTTCCAGTAGGAGCTGATGAAGAGGCCAATGTTGAGGTTCGCACCTGGGGAACTCCCCGCTCCTTTGATT TTGAGCCTTTAGCTCATTATGAGATCGGCGAAAAGCTGGATATCCTGGATTTTGCCCGGGCAGGGAAGGTTACAGGAGCT CGCTTTACTTTTTATAAAGGTTTAGGGGCCAAGCTGGAAAGAGCCCTGATCAGCTTCATGCTGGACCGGCATAGCGCTAA AGGATATGTGGAAGTTCTGCCTCCTTATATGGTTCATCGTAATTCTATGATTGGTACCGGGCAGCTTCCTAAGTTTGAAG AAGATGCTTTTAAGGTGGCGGGAACCGATTATTTCTTAATCCCTACTGCCGAAGTTCCGGTCACGAATATGTATCGGGAA GAAATCCTGGAAGCCGAGCAATTGCCGATTCATCACTGTGCCTATAGTGCTTGTTTCCGTGCGGAAGCAGGTTCGGCAGG CCGGGATACCCGGGGGCTCATCCGGCAGCATCAATTTAATAAAGTGGAACTGGTGAAGTTTGCCTTTCCTGAAAATTCCT ATGAGGAGCTGGAGTCCTTAACCCGGGATGCGGAGAGTATTCTCCAGGAGCTTGAGCTTCCCTATCGGGTGATGGCTTTA TCCACGGGGGATCTGGGCTTTACTTCAGCCAAGACTTACGATCTGGAAGTATGGCTGCCCAGCTTTAATACCTACCGGGA GATTTCTTCCTGCAGCAATTTTGAAGATTTCCAGGCCCGCCGGGCCAATATCCGTTTCCGCCGGGCACCGAAAGCCAAGC CTGAATTTCTCCATACTCTCAATGGCAGTGGTTTAGCCATTGGCCGTACGGTTTCCGCCATTCTTGAAAATTATCAGGAA GCTGACGGCAGAGTGAGAGTTCCTAAAGCACTCCAGCCGTATATGGGCGTGGAGTACATTGGGTAG Protein sequence : MLDLKFVRTNPEVVKEALKKRNSNVSLDAFLEQEEERRKLLFEVESLKAQRNTVSEEVGRRKKHGEDAEQLILEMREVGQ KVKNLEDKLGEIEQSMEAVLYEIPNIPHESVPVGADEEANVEVRTWGTPRSFDFEPLAHYEIGEKLDILDFARAGKVTGA RFTFYKGLGAKLERALISFMLDRHSAKGYVEVLPPYMVHRNSMIGTGQLPKFEEDAFKVAGTDYFLIPTAEVPVTNMYRE EILEAEQLPIHHCAYSACFRAEAGSAGRDTRGLIRQHQFNKVELVKFAFPENSYEELESLTRDAESILQELELPYRVMAL STGDLGFTSAKTYDLEVWLPSFNTYREISSCSNFEDFQARRANIRFRRAPKAKPEFLHTLNGSGLAIGRTVSAILENYQE ADGRVRVPKALQPYMGVEYIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-126 | 62 |
