Gene Information

Name : Dhaf_4676 (Dhaf_4676)
Accession : YP_002461109.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Resistance
Product : sigma 54 interacting domain-containing protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4988538 - 4989242 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: nth:Nther_2084 ABC transporter

DNA sequence : 
ATGACGCTTTTACTTGAAGGAAAAGGTATCCGCAAAGTGTACCAAACAGGTGAAGTTGAATTGGAGGTTCTTAAAGGGCT
GGATTTTCAAATCTTTGCCGGTGAGTTTATCGTGATCCTCGGGCAAAGCGGCTCCGGGAAAACCACCCTCCTCAACATTA
TCGGCGGTATGACTCCTCCCACCACGGGGGAATTGCATTACCAAGGCCAGCCTTTACATGAAGCCGGCGATGCGGAACTG
ACGTTTTACCGGCGTCAGGCCGTTGGCTTTGTCTTTCAGCATTACAATCTGATGCCCAACCTCACCGCTGCCGAGAATAT
TTGGCTGGCTGCTGAAATCGCTGACGCCCCCCTGTCCGTAAACGAAGTCCTTCAGGATGTAGGCCTGGAGCCATGGGCGG
AGCATTTTCCTTCCCAGCTCTCCGGCGGACAGCAGCAGCGGGTGGCCATTGCCCGGGCTATTGTCAAGAATCCTGCCTTA
CTTCTTTGTGATGAGCCTACCGGTGCATTGGATATTCAAACGGGTATCCAGGTCTTAAAAACGTTACAAAGGCTCAGCCG
GGATTACCAAAAGACGATCATCCTCATCACCCATAACGGGGAGATCGCCAAGATGGCCAATCGTGTGTTTTTTATCAAGG
ATGGGATGCTGGAAAAAATCCAGACCAATGAGCATCCTCTCCAGCCGGAGGAACTTTTATGGTAG

Protein sequence : 
MTLLLEGKGIRKVYQTGEVELEVLKGLDFQIFAGEFIVILGQSGSGKTTLLNIIGGMTPPTTGELHYQGQPLHEAGDAEL
TFYRRQAVGFVFQHYNLMPNLTAAENIWLAAEIADAPLSVNEVLQDVGLEPWAEHFPSQLSGGQQQRVAIARAIVKNPAL
LLCDEPTGALDIQTGIQVLKTLQRLSRDYQKTIILITHNGEIAKMANRVFFIKDGMLEKIQTNEHPLQPEELLW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-43 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-45 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-45 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_4676 YP_002461109.1 sigma 54 interacting domain-containing protein NC_012469.1.7685735. Protein 3e-49 50
Dhaf_4676 YP_002461109.1 sigma 54 interacting domain-containing protein NC_012469.1.7686878. Protein 3e-40 45
Dhaf_4676 YP_002461109.1 sigma 54 interacting domain-containing protein CP001581.1.gene798.p Protein 1e-43 44
Dhaf_4676 YP_002461109.1 sigma 54 interacting domain-containing protein NC_008702.1.4606598. Protein 4e-34 43
Dhaf_4676 YP_002461109.1 sigma 54 interacting domain-containing protein CP001581.1.gene598.p Protein 6e-38 41