Gene Information

Name : Dhaf_4626 (Dhaf_4626)
Accession : YP_002461063.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Unknown
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4928236 - 4928934 bp
Length : 699 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: lmo:lmo2678 hypothetical protein

DNA sequence :
TTGAACAATAAACCTTTACTATTAATTGTTGAGGATGATGAGAAAATCAGCAACTTTATTGCGGCCACCTTAACCGCCAA
TGATTATAAGGTCATCAGGGCGGCGAAAGGCAAGGATGCCCTTTCCCTGACTTCCTCCTATAGTCCGGATTTGATTTTGC
TCGATCTGGGTTTGCCGGATCTGGATGGCACCGAGGTTTTGAAATCACTGCGGCAATGGACGGGGATACCCATTGTGGTG
GTCTCAGCACGGGGCAATGAACAGGAAAAGGTGGAAGCTCTTGATCTGGGCGCGGACGACTATATCACCAAACCTTTTGG
AACTTTGGAGCTGCTGGCCAGAATCAGAACTGCCATCCGGCATAGTCAGAAGAATTTAATGATGAGCCCCGGGGAGCAGG
AAAAAGTAACAGTGGGACATCTTGAGATCGATTATCAGAAAAGGCGTATTCTACTTGATGGCCAGGAGGTCCATTTTACC
CCCATTGAATATAAGATCATGGTTCTGCTGGCCAGAAATATCGGCAAGGTCCTCACCCATGATTTTATCATGAAAGAAGT
ATGGGGGCCCTATACCAATGAAATCCAGGCACTGCGGGTCAACATGGCCAATATCCGCAGAAAGATCGAGCAGAACCCGG
GAGAGCCCCGCTATATTGTTACCGAAGTCGGCGTCGGCTATCGCATGATGGAAGACTAG

Protein sequence :
MNNKPLLLIVEDDEKISNFIAATLTANDYKVIRAAKGKDALSLTSSYSPDLILLDLGLPDLDGTEVLKSLRQWTGIPIVV
VSARGNEQEKVEALDLGADDYITKPFGTLELLARIRTAIRHSQKNLMMSPGEQEKVTVGHLEIDYQKRRILLDGQEVHFT
PIEYKIMVLLARNIGKVLTHDFIMKEVWGPYTNEIQALRVNMANIRRKIEQNPGEPRYIVTEVGVGYRMMED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 7e-45 50
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 1e-44 50
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 4e-31 46
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 8e-31 45
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 8e-31 45
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 8e-31 45
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 8e-31 45
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 6e-31 45