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Name : Dhaf_0389 (Dhaf_0389) Accession : YP_002456892.1 Strain : Desulfitobacterium hafniense DCB-2 Genome accession: NC_011830 Putative virulence/resistance : Virulence Product : ATPase AAA Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 429989 - 432469 bp Length : 2481 bp Strand : + Note : PFAM: UvrB/UvrC protein; ATPase AAA central domain protein; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA; KEGG: hmo:HM1_1344 ClpC ATPase DNA sequence : ATGAATGAAAAATATACGGAAAAGGCTCTCAAGGCGCTGCAATTCGCCTCAGACGAAGCTAAGCGCATGGGCTCCAATGT GATTGGCACCGAGCATCTGCTGCTTGGTTTAGTGGCTGAAGGGGAAGGTATCGCCGCCAAATCCCTTCATGGCATCGGGG TGACTCCGGAGAAAATCCGGGAACAAATCGGCAACCTGACTGGTATCGGCCAGCCTTTTACCGGAGAGGTAAGCCTGACT CCCCGGGTTAAACGGGTAATGGAGCTGGCTCATGAAGAAGCCCGTCGTCATGGGGTCAGCTATATCGGTACTGAGCATCT GCTCCTCGGTCTGCTGATGGAAGGAGAAGGTGTAGCGGCCCGGGTGCTGCGCAATCTCGGTGTGAGCCCGGAAAGAATTT GGAAGCAAGTGGTTCAGCTTTTAGGAGGTCAACCGGATGATATTCCCATGCCCGGCGGTGCTCCCGGGCCCGGCACAGCC AAGAATAACGGAGCTGCCAATACGCCGGCTTTGAATGAATTTGGCCGGGATCTGACCCAGCAAGCCCGGGAGGGCAGGCT GGACCCGGTAGTGGGACGGGAAGACGAGATTGAGCGTGTAGTTCAGGTCCTCAGCCGCCGCACCAAAAATAATCCTGTGC TCATCGGCGAACCGGGGGTAGGGAAAACGGCCATTGCCGAGGGGCTGGCCCAACGGATCATCAATAATAAAGTGCCCGAA ACCCTGGCGGGCAAGCGGGTGGTTACCTTAGATCTCTCCGCTGTGGTGGCTGGAAGCAAGTATCGCGGGGAATTTGAAGA GCGCCTGAAAAAGGTCATGGAAGAGATTCGGGTGGACGGCCGCATTATCGTTTTCATCGATGAGCTTCACACCTTAATCG GAGCCGGAGCGGCTGAAGGAGCCATCGATGCGGCCAATATCCTCAAACCGGCCTTAGCCCGGGGAGAGCTCCAATGCATC GGCGCGACGACCTTGGATGAATATCGTAAATATATTGAAAAAGATCCCGCTCTGGAGCGGCGTTTCCAGCCTATTACGGT AGGAGAGCCTACAGTAGAGCAGGCTGTTCAGATTCTCTTGGGTTTACGGGATCGTTATGAAGCCCATCACCGGACCCAGA TTACCGATGAAGCGGTGGAAGCAGCTGTGAAGATGTCCGATCGCTATATCTCGGATCGCTTCCTTCCCGATAAGGCCATT GATTTAATGGATGAGGCTGCTTCCCGTGTGCGCTTGGCAGCCTTTACAGCTCCCCCCGATCTTAAGTCTTTGGAAGAAAA GATCGAAGCCTTAAAGAGTGAGAAGGAAGCGGCTGTCTTAGGTCAGGAGTTTGAAAAAGCGGCTAAATTCCGGGATGAGG AGCATCAGCTTCGGGAAGAGCTTGCTCAGCTTCGCAACACCTGGGAGAGTAAACGGGATATAAGCCAAAGTCAGGTCACC GCCGATGATATCGCTCAGATCGTGGCCAGTTGGACAGGAATTCCGGTGAAGAAGCTGGCTCAGGAAGAAAGCGAACGGCT CCTGGGCTTGGAAGAAACTCTCCATCAACGGGTGGTGGGGCAAGAAGATGCTGTGAAGGCTGTTTCCCGCGCTGTGCGGC GGGCTCGTGCCGGATTGAAAGATCCCAAACGCCCGGTAGGTTCCTTCATCTTCCTCGGGCCCACCGGCGTGGGCAAGACC GAACTGGCCCGGGCTTTGGCAGAAGCTTTATTTGGTGAGGAAGACGCTCTGATTCGTATCGATATGTCCGAATATATGGA GAAGCATGCGGTTTCCCGTCTGGTGGGAGCACCTCCCGGATACATCGGTCATGATGAAGGGGGCCAATTGACCGAAGCCA TCCGCCGTAAACCCTATAGTGTTATCCTGCTGGATGAAATCGAAAAAGCTCATCCTGAGGTCTTCAATATCCTGCTGCAG GTTCTGGAGGATGGCCGTCTCACCGATACCAAGGGCAGGACGGTGGATTTCCGTAATGCGGTGATTATTATGACCTCCAA TGTGGGCGCTTCCTTCATGAAGAAAGAAGCTTTGGGCTTTGCCTCCCGCCGGGATGAGGAAACCGAGTACAAGAATATGA GCTCACGGGTAATGGAGGAACTGAAAAAGACCTTCCGTCCGGAGTTCCTCAACCGGGTGGACGAAATTGTGGTCTTCCAT TCCCTGCAAACTGAGGGACTCTTGAAGATTACCGAGATTTTGATGAAGCAGGTTAATGGCCGTCTCCAGGAACAGGGCTA TGATCTGCAGGTGGAAAAGAGTGCTCTTGAGCTGATTGCCAAAGAGGGCAATGATCCTACCTTCGGCGCCCGTCCTCTGC GCCGGGCTATCCAACGCCTGATCGAAGACAGCTTGTCGGAAAAGATTCTCCTCGGAGAATTTAAGTCCGGGGACAAAATC AAAGTTGAGGCCGTAGAGGACAAGATGAAATTCGCCAAAGTCAGAGCCCGTAAAAGCAAAAAGGCCGAAGCGGCGGAGTA G Protein sequence : MNEKYTEKALKALQFASDEAKRMGSNVIGTEHLLLGLVAEGEGIAAKSLHGIGVTPEKIREQIGNLTGIGQPFTGEVSLT PRVKRVMELAHEEARRHGVSYIGTEHLLLGLLMEGEGVAARVLRNLGVSPERIWKQVVQLLGGQPDDIPMPGGAPGPGTA KNNGAANTPALNEFGRDLTQQAREGRLDPVVGREDEIERVVQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINNKVPE TLAGKRVVTLDLSAVVAGSKYRGEFEERLKKVMEEIRVDGRIIVFIDELHTLIGAGAAEGAIDAANILKPALARGELQCI GATTLDEYRKYIEKDPALERRFQPITVGEPTVEQAVQILLGLRDRYEAHHRTQITDEAVEAAVKMSDRYISDRFLPDKAI DLMDEAASRVRLAAFTAPPDLKSLEEKIEALKSEKEAAVLGQEFEKAAKFRDEEHQLREELAQLRNTWESKRDISQSQVT ADDIAQIVASWTGIPVKKLAQEESERLLGLEETLHQRVVGQEDAVKAVSRAVRRARAGLKDPKRPVGSFIFLGPTGVGKT ELARALAEALFGEEDALIRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTEAIRRKPYSVILLDEIEKAHPEVFNILLQ VLEDGRLTDTKGRTVDFRNAVIIMTSNVGASFMKKEALGFASRRDEETEYKNMSSRVMEELKKTFRPEFLNRVDEIVVFH SLQTEGLLKITEILMKQVNGRLQEQGYDLQVEKSALELIAKEGNDPTFGARPLRRAIQRLIEDSLSEKILLGEFKSGDKI KVEAVEDKMKFAKVRARKSKKAEAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dhaf_0389 | YP_002456892.1 | ATPase AAA | VFG0079 | Protein | 0.0 | 63 |
| Dhaf_0389 | YP_002456892.1 | ATPase AAA | VFG0080 | Protein | 3e-145 | 51 |
| Dhaf_0389 | YP_002456892.1 | ATPase AAA | VFG2084 | Protein | 2e-94 | 44 |
