|
Name : Dhaf_3971 (Dhaf_3971) Accession : YP_002460420.1 Strain : Desulfitobacterium hafniense DCB-2 Genome accession: NC_011830 Putative virulence/resistance : Resistance Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 4222289 - 4224079 bp Length : 1791 bp Strand : - Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: amt:Amet_3808 ABC transporter DNA sequence : ATGAATCAGCAATCAAGCGGGATAAAACGGCTTCTTGAATTTACCGGCCAAAGCCGGGGCCTGCTCACCCTATCCCGTAT CTTATCCGGGATCAGCGCGCTGTTTATCCTGGGACCGTTTCTGTGTGTTTACTTTGCCGCTAAAGATTTGGTGAATGTCT TTGCGGGGGGCTCCCTGGACCCAGAGAGCCTTGTCCGGTGGGGAGTTCTGGCCCTTATCCTGGAGTTAATCGGGCTGGCC CTCTATTTTGCGGCCCTGCTTTGTTCCCATGTGGTGGCTTTCCGCACGGAAAAGAATTTAAAGATGGCCGTCCTCACCCA TCTGGCCAAAATGCCCCTGGGCTATTTTGATCGGAATCCCAGCGGCAAGCTGCGTAAAATCATTGATGATAACAGCTTTC AGACCCAAACCTTTATTGCCCACCAGCTCCCGGATTTAGTGGGAGCTCAGGTGACGATGGCCGCCAGTCTCGTCCTCATG CTGCTCTTTGACTGGCGGGTGGGTCTGCCGCTGCTGCTGCTGTTTGGGGTGGGCTTTTTTCTGCAAGGTTCCCTGAACGG CAAAGAGAGCATGAAGTTTATGCAAAGCTATCAGGACGCTCTGGAGACCATGAATCATGAGGCTGTAGAGTATATAAGAG GGATCTCGGTGGTCAAGGTGTTCGGGCAGACGGTGCATTCCTTCAGCAAATTCAATGCCGCTATCCAATCCTATCGGGAT GACGCCCTGGCCTTTACCATGTCCTGTAAAAAAGGGATGGTGGCCTTTAACTCCATCGTCAATTCCAGCTTTCTGGTGCT GGTGCCGGCGGCCTTGCTCATCGGGCTGGTTTCTCCCGATTTGCCGGGCTTTATGCAGAGCTTTCTGTTTTACCTGATCT TTTCGCCGGCCTGTGCCGTCATGCTCAACAAAATCATGTATATGACCAGCTACAAAATGCAGGCCGAGGAATCCATGCGC AGAATTGATGGGATTCTGAGCGCCGAGCCCCAAAGGGAAGCGGCCCGGCCCCAGACGGCCGGCGGCCATGAGATCTCCTT CGCAGACGTCACCTTCAGGTATGAGGGGACGGACCATCCGGCGGTGTCCCACCTCAGCTTTATCGCCAAGCCGGGGACCA CTACGGCCCTGGTGGGGCATTCCGGTTCCGGGAAAAGCACCACGGCCAGCCTGATTCCCCGTTTTTACGATGTTCAGGAG GGTGTGATTAAGATCGGCGGGGTGGACATCAGAGAGATGGCCTCTGAGGATTTGATGAGAAAGGTGGCTTTTGTCTTTCA AAACCCCAGGCTGTTCAAGGATACCCTGCTGGCCAATATTCGCGCCGCCCGGCCGGAGGCCACCAGGGAAGAAGCTTTGC AGGCGGCCCATCTGGCCCAATGCGATGATATTTTAGCCAAGCTGCCCCAAGGGATCGATACGGTGGTGGGCAGTAGGGGG GTTTATCTTTCCGGCGGTGAGACCCAGCGGATTGCCATCGCCAGGGCGATTCTGAAGGACGCTCCCATCGTCCTGCTGGA TGAGGCCACCGCCTATGCCGATCCGGAGAGTGAGCAGCAGATTCAGCAGGCCTTTAAGGGGCTTACCAAGGGCAAAACCG TGGTCATGATTGCCCACCGCCTGTCCACGGTGCGGGATGCCGGGCAGATTGTGGTGATGAAGCAGGGCGGGATTGTGGAA AAGGGGACCCATGACGGGCTGGTGGCTCAGGGAGGGGAATATGCCCGGATGTGGGATAACTATCAAAAATCCACCCAATG GCATATTGGAGGGGAGGTAAGGTCATGCTGA Protein sequence : MNQQSSGIKRLLEFTGQSRGLLTLSRILSGISALFILGPFLCVYFAAKDLVNVFAGGSLDPESLVRWGVLALILELIGLA LYFAALLCSHVVAFRTEKNLKMAVLTHLAKMPLGYFDRNPSGKLRKIIDDNSFQTQTFIAHQLPDLVGAQVTMAASLVLM LLFDWRVGLPLLLLFGVGFFLQGSLNGKESMKFMQSYQDALETMNHEAVEYIRGISVVKVFGQTVHSFSKFNAAIQSYRD DALAFTMSCKKGMVAFNSIVNSSFLVLVPAALLIGLVSPDLPGFMQSFLFYLIFSPACAVMLNKIMYMTSYKMQAEESMR RIDGILSAEPQREAARPQTAGGHEISFADVTFRYEGTDHPAVSHLSFIAKPGTTTALVGHSGSGKSTTASLIPRFYDVQE GVIKIGGVDIREMASEDLMRKVAFVFQNPRLFKDTLLANIRAARPEATREEALQAAHLAQCDDILAKLPQGIDTVVGSRG VYLSGGETQRIAIARAILKDAPIVLLDEATAYADPESEQQIQQAFKGLTKGKTVVMIAHRLSTVRDAGQIVVMKQGGIVE KGTHDGLVAQGGEYARMWDNYQKSTQWHIGGEVRSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-114 | 44 |
