Gene Information

Name : Dhaf_3948 (Dhaf_3948)
Accession : YP_002460398.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 4189129 - 4190013 bp
Length : 885 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cac:CAC2734 ABC-type multidrug transporter, ATPase component

DNA sequence :
ATGGATTATGTTCTGACAACCCATGCCTTAAGCAAGCACTACGGACAGTTTAAGGCCCTGAACGGACTTTCCCTCCACGT
TCCCCAAGGAGCGATCTACGGCTTCGTCGGCAAAAACGGTGCCGGCAAAACCACTTTGATCCGGCTGGTTTGCGGACTGC
AAAGGCCCACCTCCGGCGATTATTCCCTGTACGGAGTATCAAGCCGGACAAGAGAGATTGTGAAATCCCGTCGCCGGATG
GGAGCGGTGGTGGAGACGCCGTCGATTTATCTGGAGATGACAGCCCGGGAAAACCTCAAGGAGCAGTACCGTGTTCTGGG
CTTACCCTCCTTTGAGGGAATCCCGGAGCTTCTGGAGCTGGTAGGACTGGCGGAAGCAGGCCAAAAGAAAGCCAAAAACT
TCTCCCTGGGTATGAAGCAGCGTTTGGGTATCGCCGTGGCCCTCTGCGGTGATCCGGATTTTCTGGTGCTGGACGAGCCG
GTCAATGGGCTTGATCCCCAGGGCATTATTGAAATGCGGGAACTCATTTTAAAGCTTAATCGGGAGCAGCGGATCACCGT
CCTTATTTCCAGTCATATCCTTGATGAACTGGCCAGGCTGGCCACCCATTACGGCTTTATTGACGGTGGGCGCATGGTGA
AAGAGATCAGCGCCGGGGAGTTGGAAGAGGCTTGCCGCAAATGCCTGCGTGTAGAGGTTTCTTCCACAGAAACGCTAGCT
CGGGTCCTGGACGGCCTGCAGCTGGACTATAAGATCCTTTCCGAACGCAGGGCCGATGTCTTCGCTAAAGTCAATATCTC
ACAGCTCACCCTGGCCCTGGCCCGGGAGGGCTGTGAGGTGATTTCCGTGCAGGAAAGGGACGAAGGCCTGGAAGCTATTA
TCTGA

Protein sequence :
MDYVLTTHALSKHYGQFKALNGLSLHVPQGAIYGFVGKNGAGKTTLIRLVCGLQRPTSGDYSLYGVSSRTREIVKSRRRM
GAVVETPSIYLEMTARENLKEQYRVLGLPSFEGIPELLELVGLAEAGQKKAKNFSLGMKQRLGIAVALCGDPDFLVLDEP
VNGLDPQGIIEMRELILKLNREQRITVLISSHILDELARLATHYGFIDGGRMVKEISAGELEEACRKCLRVEVSSTETLA
RVLDGLQLDYKILSERRADVFAKVNISQLTLALAREGCEVISVQERDEGLEAII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 3e-23 44
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 3e-23 44
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 3e-23 44
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 3e-23 44