Gene Information

Name : Dhaf_3870 (Dhaf_3870)
Accession : YP_002460322.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 4109276 - 4110190 bp
Length : 915 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbe:Cbei_2844 ABC transporter

DNA sequence :
ATGGCTGATATTATCAAAACACAGGGTCTGTGTAAGCACTATGGCAAGACGCCGGGAGTCAGTGATTTGGATCTGTCGGT
TGCCGAGGGAGCCGTCTACGGTTTTCTTGGTCCCAATGGCGCCGGCAAATCGACAACACTCAAAATGATTCTGGGGCTGG
TTAAGCCCACTGCCGGCAGCATTACGGTATTCGGCAAAACCATGAATCACCGCAGCCGCATGTCCATTCTCAAGGATGTG
GGCTCTTTAATCGAGTCCCCCAGCTATTATGGCCATTTAAGCGGCTACGAAAATCTCCGGATTATTGCCACCCTTAAAGG
TACTCCGGAAAAAGACATCGGCCGAGTTCTGGAGATTGTCCGGCTGGAAAACCAAAAAAACAAAAAGACAAATCAATATT
CTTTGGGCATGAAGCAGCGTTTGGGGCTGGCCTGCGCCCTTTTGGGCAATCCCCGGCTTTTAATTCTGGATGAACCTACC
AATGGGCTTGATCCCGCCGGGATTCAGGAAATGCGGGAGCTGATCCGTTCCCTGCCCAAGGAGTACGGGATCACGGTTCT
GGTCTCCAGCCATTTGCTCAGTGAGATTGAGCAAATGGCGACCAATCTGGGCATCATCAGCAAGGGCCGGCTTGTTTTTC
AAAGCAGCCTAGGGGCCCTGCACCAAAAAAGCAGCCCCAGCATAGCCATCCGCACTTTGGATAACCACCGGGCCGCCGCT
GTTCTGAGAGAACAAGGTATTGCTGTTCAGTGCCAGCAGGATTACCTGCTCCTCCCAGCCTTTGCGGATGGGGAATTGTC
CCGTTTAACTCTGAACCTGTTTGAACAGAAGGTAGGGGTCGTGCGGATTGAGCAGCGCGAAAAAAGCCTGGAAGATATCT
TCCTAGAACTGACGGGATCGGCGGTGAGTTTATGA

Protein sequence :
MADIIKTQGLCKHYGKTPGVSDLDLSVAEGAVYGFLGPNGAGKSTTLKMILGLVKPTAGSITVFGKTMNHRSRMSILKDV
GSLIESPSYYGHLSGYENLRIIATLKGTPEKDIGRVLEIVRLENQKNKKTNQYSLGMKQRLGLACALLGNPRLLILDEPT
NGLDPAGIQEMRELIRSLPKEYGITVLVSSHLLSEIEQMATNLGIISKGRLVFQSSLGALHQKSSPSIAIRTLDNHRAAA
VLREQGIAVQCQQDYLLLPAFADGELSRLTLNLFEQKVGVVRIEQREKSLEDIFLELTGSAVSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 2e-82 59
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 2e-56 45
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 1e-38 45
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 1e-35 44
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 6e-29 43
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 6e-29 43
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 6e-29 43
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 6e-29 43