Gene Information

Name : rplS (Dhaf_3755)
Accession : YP_002460207.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 3991726 - 3992067 bp
Length : 342 bp
Strand : -
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGGATTTTATTCGCATGATTGAAGAAGAACAAATGAAAAAAGATCTTCCTGCCTTCCGTCCTGGAGATACCGTACGTGT
CCACGTTAAGGTTGTCGAGGGTACCCGGGAACGTATTCAGGCTTTCGAAGGGGTTGTCATCAAGATGAAAGGCGGCGGTC
TGCGCCGGACTTTCACCGTGCGTCGGGTAACTTATGGTGTAGGAGTAGAGCGGACTTTCCCGCTGCATTCTCCTCGCATT
GACCGCATTGAGGTAATACGCCGCGGTATCGTACGCCGTGCCAAACTCTACTACCTACGTGAACTTTCAGGTAAAGCAGC
GCGGATTCGCGACCGTCGCTAG

Protein sequence :
MDFIRMIEEEQMKKDLPAFRPGDTVRVHVKVVEGTRERIQAFEGVVIKMKGGGLRRTFTVRRVTYGVGVERTFPLHSPRI
DRIEVIRRGIVRRAKLYYLRELSGKAARIRDRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-26 69
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 3e-25 62