Gene Information

Name : Dhaf_3715 (Dhaf_3715)
Accession : YP_002460167.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3946904 - 3947800 bp
Length : 897 bp
Strand : -
Note : PFAM: integrase; integrase domain protein SAM domain protein; KEGG: swo:Swol_0842 hypothetical protein

DNA sequence : 
ATGCAAGCCGATCATGCCCTCAGCCTATTCGACGGTCACCTAAAAACCCAAAACCGTTCCCAGCATACTCTCATGGCTTA
TCATAAGGACCTCATCCAATTTTTTGTGTTTGCCGCCCGGGAGCTGGGAGAAGAGCCGGAAAAAGTGACCGTCGATCAAG
TGGATATTTATATCGTGCGCAGTTTCCTCGGTGAAATGACGGATCGGGGTCTGGAGAGAAAAAGCATGGCTCGCAAACTT
TCTGCCTTGAGAGCCTTTTTTAAGTTCCTTTGCCGGGAGGGGATCCTGCAGAAAAACCCCATTCAGCGCATAGCCACCCC
TAAGCTGGGCAGAAAGCTTCCCCACTTTCTCTCCCTGGAGGAATTGGATCGATTAATTCGCACTCCTGATTGTGCCACAC
TGCTGGGAGCGCGGGACCAGGTGATCCTGGAATTGCTCTATGGCTCAGGTTTACGGGTCAGCGAGCTGGCGGATCTTAAC
CGTCAGGATATCGATGCGGGAAGTTCTCTCTTGCGGGTTCGCGGCAAAGGAAATAAAGAGAGAATTGTTCCCTTGACCAA
CTATGCTCTGGAAGCCGCCCGCCAGTATCTGGAGATGAGAGAGGACAAACAAGAGGCCTTGCTTTTGAATTATCAGGGCA
CAAGGCTCTCCGTTCGTTCTATACGGCGAATTCTCGACGGATTGGCTTTGGAGGCTGGATTATCCCAACACCTTCATCCC
CACATGCTTCGCCACTCCTTTGCCACCCACTTGCTTGATGGCGGAGCCGATCTCCGCAGTGTTCAGGAGCTTTTAGGGCA
TGCCAAGCTCTCCTCTACCCAGATTTACACTCATTTAACCAAGGAGCGTTTGCGGGAGGTTTATGAACAAAATCATCCCC
GTGCTAAGAAAATGTGA

Protein sequence : 
MQADHALSLFDGHLKTQNRSQHTLMAYHKDLIQFFVFAARELGEEPEKVTVDQVDIYIVRSFLGEMTDRGLERKSMARKL
SALRAFFKFLCREGILQKNPIQRIATPKLGRKLPHFLSLEELDRLIRTPDCATLLGARDQVILELLYGSGLRVSELADLN
RQDIDAGSSLLRVRGKGNKERIVPLTNYALEAARQYLEMREDKQEALLLNYQGTRLSVRSIRRILDGLALEAGLSQHLHP
HMLRHSFATHLLDGGADLRSVQELLGHAKLSSTQIYTHLTKERLREVYEQNHPRAKKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-42 43
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-42 43