Gene Information

Name : Dhaf_3473 (Dhaf_3473)
Accession : YP_002459927.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3707953 - 3708627 bp
Length : 675 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: afe:Lferr_0205 ABC transporter

DNA sequence : 
TTGACTCTTTGCAGACTGGAGAAAGTCAGTAAAACCTATGCGATGGGTGAAGTGGTTTGCCCGATCAATGAAGTTTCCCT
CACCGTGGACAAAGGTGATTTTCTGGCCATCGAAGGCCCCTCCGGCACGGGCAAGAGCACACTGCTGTACATTATGTGCG
GGTTGTTAAGGCCTACCGGCGGGGACGTTTTCTTAAAGGATGAGAACCTGAGCAGCCTGCCGGATACCAAGGTGACAGAG
CTGCGGGGAGACCTTGTCGGCTTTGTGTTTCAGGAAACCAATCTTTTGCAAGCATTAACCGTGGAAGGCAACTTGCGGTT
TGCCCAAAGTGTTGGCAAGGGGAAGAAGCCGGATGAAGCAAAAATCTCCCGCTATCTGGAAGAGCTGGGGCTGAGTTCAA
GACGGGATTTTCTGCCGGGCCAGCTCAGTGTGGGGCAGCGCCGCAGGCTGATTGTAGCCAGGGCCTTAATCAATGATCCT
CAGCTTATTTTGGCAGATGAGCCGACCAATGACCTGGATGAGATGTGGGCAGGGAAGGTTATGGCTCTTTTGACCGGGGC
TGTGGGGGGCGGTGGTGCTGTCGTTATGGTCACTCATAATCCCCAATGGGCTGAAAAAGCGACTAAACGCTATCTTATGC
AAGAAGGAAGGCTTGTGGAGAATGGGCAGATATAA

Protein sequence : 
MTLCRLEKVSKTYAMGEVVCPINEVSLTVDKGDFLAIEGPSGTGKSTLLYIMCGLLRPTGGDVFLKDENLSSLPDTKVTE
LRGDLVGFVFQETNLLQALTVEGNLRFAQSVGKGKKPDEAKISRYLEELGLSSRRDFLPGQLSVGQRRRLIVARALINDP
QLILADEPTNDLDEMWAGKVMALLTGAVGGGGAVVMVTHNPQWAEKATKRYLMQEGRLVENGQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_3473 YP_002459927.1 ABC transporter CP001581.1.gene798.p Protein 3e-27 45