Gene Information

Name : Dhaf_0031 (Dhaf_0031)
Accession : YP_002456536.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 29478 - 30233 bp
Length : 756 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rca:Rcas_1723 ABC transporter

DNA sequence : 
GTGGATATGAAGGGGATGGAGCATGCGGTAGAGGTGGAAACCCTCACCGTGGCCTATGATGCCAAACCAGTTTTATGGGA
TGTTAATCTCAAGGTACCCAAGGGAACTTTGATGGCGGTGGTCGGGCCCAATGGGGCAGGCAAAACAACCTTGATTAAGG
CGATGCTGGGGCTGTTGACGCCCGTCACCGGGGCAATTTGCTTCAGCGGGGGAAAGGGCGACGGCCATGCCCTGAAAAAC
CGCATCGGCTACGTTCCCCAAAGCGGCAGTGTGGACTGGGATTTCCCGGCCACGGTGCAGGATGTGGTCCTGATGGGCTG
CTATGGTAAGCTGGGCTGGTTCAGGCGGCCCCGCAAGGCGGATTATGAGCTGACCGCTCAAATGCTGAAAAAGGTGGGAA
TGGAGCAATACGCCTCCCGCCAGATCAGCCAGCTTTCCGGCGGCCAGCAGCAACGGGTGTTCCTGGCCCGGGCCCTGGCC
CAGGAGGCTGAGATTTACTTCATGGATGAGCCCTTCAAAGGAGTGGATGCCCAAACGGAAAAAGCCATTGTCTTGCTCCT
GAAGGAACTCAAAGAGCAGGGAAAAACAGTGATGGTGGTCCATCACGATCTGCAGACAGTGGCCGATTATTTCGACTGGG
TGACCCTAATCAATCTGCGGGTGATTGCCAGCGGACCGGTGGAAGAGGTTTTTCATGAGGAAAACCTGAAGATGGCTTAC
CGGAGTACCGGTGCCCTTTTGAGGAGCGTCGTGTGA

Protein sequence : 
MDMKGMEHAVEVETLTVAYDAKPVLWDVNLKVPKGTLMAVVGPNGAGKTTLIKAMLGLLTPVTGAICFSGGKGDGHALKN
RIGYVPQSGSVDWDFPATVQDVVLMGCYGKLGWFRRPRKADYELTAQMLKKVGMEQYASRQISQLSGGQQQRVFLARALA
QEAEIYFMDEPFKGVDAQTEKAIVLLLKELKEQGKTVMVVHHDLQTVADYFDWVTLINLRVIASGPVEEVFHEENLKMAY
RSTGALLRSVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-47 47
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 3e-47 47
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-50 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-50 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-50 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 8e-50 44
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-49 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_0031 YP_002456536.1 ABC transporter BAC0400 Protein 2e-65 56
Dhaf_0031 YP_002456536.1 ABC transporter BAC0440 Protein 2e-49 45
Dhaf_0031 YP_002456536.1 ABC transporter BAC0350 Protein 5e-50 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_0031 YP_002456536.1 ABC transporter VFG0526 Protein 5e-50 44