Gene Information

Name : Dhaf_2286 (Dhaf_2286)
Accession : YP_002458753.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2469726 - 2470421 bp
Length : 696 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cpy:Cphy_3429 two component transcriptional regulator

DNA sequence : 
ATGTTAACTCTATTGATTGCCGATGATAATAAACAAATTACATCGATCTTAGAAGAATATGCGAAAAAAGAAGGCTATCA
GCCTCATATAGCCTGGGATGGCTGCGCAGCTCTGGAACTTTTTCAGCAGCTTCAACCCGATCTGGTCTTATTGGATGTAA
TGATGCCTAAAGTTGATGGTTTTGAAGTCTGCCGGGAAATTCGTAAAACTTCCAACGTCCCCATCATCATGATTACTGCT
CGGGGGGAGGATTTTGAAAGGATCATGGGGCTGGATATCGGGGCGGATGATTATATCGTCAAGCCCTTTTCCCCCGGCGA
AGTGATGGCGAGAATCCGCGCCATTCTGCGCAGAATCAGTCAAAACGACGAGGAGAAAAAACAAATCCTGTCTTATGCTA
ACCTGATGATCAATCTGGATGACTATCTTGTGACCATTGATCAATGCCCGGTCTCCTTAACCAAGAAAGAGATCGAAATC
CTCTGGACTCTGGCAACGAATCACAACAGAGTGTTCTCCCGGGATAATCTGCTCAACAGCGTATGGGGCTATGATTACTT
TGGCGATATCCGTACCGTGGATTCCCATATTAAACGTTTGCGTTCCAAACTGGATTCCTTCCCCCATGAACAATGGGAGA
TTAAGACCATTTGGGGTGTAGGCTATAAATTCGGGGAGAAAACCAATGAAGAATAA

Protein sequence : 
MLTLLIADDNKQITSILEEYAKKEGYQPHIAWDGCAALELFQQLQPDLVLLDVMMPKVDGFEVCREIRKTSNVPIIMITA
RGEDFERIMGLDIGADDYIVKPFSPGEVMARIRAILRRISQNDEEKKQILSYANLMINLDDYLVTIDQCPVSLTKKEIEI
LWTLATNHNRVFSRDNLLNSVWGYDYFGDIRTVDSHIKRLRSKLDSFPHEQWEIKTIWGVGYKFGEKTNEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-27 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 9e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_2286 YP_002458753.1 transcriptional regulator HE999704.1.gene1528. Protein 1e-30 44
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_012469.1.7685629. Protein 9e-42 44
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_002952.2859905.p0 Protein 2e-39 44
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_009641.5332272.p0 Protein 1e-39 43
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_013450.8614421.p0 Protein 1e-39 43
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_007793.3914279.p0 Protein 1e-39 43
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_007622.3794472.p0 Protein 1e-39 43
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_002745.1124361.p0 Protein 1e-39 43
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_009782.5559369.p0 Protein 1e-39 43
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_002951.3237708.p0 Protein 1e-39 43
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_003923.1003749.p0 Protein 1e-39 43
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_002758.1121668.p0 Protein 1e-39 43
Dhaf_2286 YP_002458753.1 transcriptional regulator DQ212986.1.gene4.p01 Protein 7e-35 43
Dhaf_2286 YP_002458753.1 transcriptional regulator AF155139.2.orf0.gene Protein 5e-38 42
Dhaf_2286 YP_002458753.1 transcriptional regulator FJ349556.1.orf0.gene Protein 3e-39 42
Dhaf_2286 YP_002458753.1 transcriptional regulator HE999704.1.gene2815. Protein 1e-37 42
Dhaf_2286 YP_002458753.1 transcriptional regulator BAC0596 Protein 5e-33 42
Dhaf_2286 YP_002458753.1 transcriptional regulator CP001918.1.gene3444. Protein 2e-32 42
Dhaf_2286 YP_002458753.1 transcriptional regulator CP001138.1.gene2239. Protein 5e-33 42
Dhaf_2286 YP_002458753.1 transcriptional regulator CP000034.1.gene2186. Protein 1e-32 42
Dhaf_2286 YP_002458753.1 transcriptional regulator NC_002695.1.916589.p Protein 1e-32 42
Dhaf_2286 YP_002458753.1 transcriptional regulator BAC0039 Protein 1e-32 42
Dhaf_2286 YP_002458753.1 transcriptional regulator AE015929.1.gene1106. Protein 4e-34 41
Dhaf_2286 YP_002458753.1 transcriptional regulator AE000516.2.gene3505. Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_2286 YP_002458753.1 transcriptional regulator VFG1563 Protein 2e-27 42
Dhaf_2286 YP_002458753.1 transcriptional regulator VFG1702 Protein 3e-27 41