Gene Information

Name : Dhaf_2231 (Dhaf_2231)
Accession : YP_002458700.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2410802 - 2411482 bp
Length : 681 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: cbe:Cbei_3565 transcriptional regulator

DNA sequence :
TTGAGCCAAACTATCCTGATTATTGAGGATGAAGAAAAAATTGCCCGCTTTGTAGAGCTTGAGCTTGGTTATGAAGGGTA
TACTGTAACCAAGGCCTTTGATGGCCGAACAGGGCTTGAGCTGGCGGAAACCGGCCGGTTTGACTTAATCCTGCTTGATG
TCATGCTGCCTAAATTAAACGGTACGGAGGTTCTGCGGAGAATCCGCCGGACCTCTGCCGTCCCCATCATCATGCTTACG
GCCCGGGACAGTGTCATGGATAAGGTCTCCGGCCTGGACAGCGGGGCCAATGATTATATCACCAAACCCTTTGCCATCGA
GGAACTTCTGGCCCGGATCCGCAACGCTCTGAGAAACACGGCCCCCCTATCCTCTACAGAGGTTCTCTCTGCTTCCGGTC
TGGAACTCGATGCCGACCGCCGCACCGTGACCATGAGAGGCAAGCCCGTTGATTTAACCAAACGGGAATTCGACCTCTTG
CACTTTCTCCTGAAAAACAAAGGAATCGTCCTCTCCCGGGAATCCCTTCTGGAAAATGTCTGGGGCTTTGATTTTGCAGG
AGACACCAATGCTGTGGATGTCTACATACGCTTTCTCCGCGGAAAAATTGACGAAGTGTTCAATGTTAAATTTATTCACA
CCGTCAGAGGAGTAGGATATGTGATTAAAGATGACCAATAA

Protein sequence :
MSQTILIIEDEEKIARFVELELGYEGYTVTKAFDGRTGLELAETGRFDLILLDVMLPKLNGTEVLRRIRRTSAVPIIMLT
ARDSVMDKVSGLDSGANDYITKPFAIEELLARIRNALRNTAPLSSTEVLSASGLELDADRRTVTMRGKPVDLTKREFDLL
HFLLKNKGIVLSRESLLENVWGFDFAGDTNAVDVYIRFLRGKIDEVFNVKFIHTVRGVGYVIKDDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-48 48
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 9e-48 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_2231 YP_002458700.1 transcriptional regulator HE999704.1.gene1528. Protein 6e-50 52
Dhaf_2231 YP_002458700.1 transcriptional regulator AE015929.1.gene1106. Protein 7e-47 51
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_007622.3794948.p0 Protein 7e-51 50
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_003923.1003417.p0 Protein 7e-51 50
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_013450.8614146.p0 Protein 7e-51 50
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_002951.3238224.p0 Protein 7e-51 50
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_007793.3914065.p0 Protein 7e-51 50
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_002758.1121390.p0 Protein 7e-51 50
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_010079.5776364.p0 Protein 7e-51 50
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_002952.2859858.p0 Protein 7e-51 50
Dhaf_2231 YP_002458700.1 transcriptional regulator BAC0197 Protein 1e-45 49
Dhaf_2231 YP_002458700.1 transcriptional regulator BAC0308 Protein 5e-43 46
Dhaf_2231 YP_002458700.1 transcriptional regulator BAC0125 Protein 6e-45 45
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_012469.1.7685629. Protein 1e-42 44
Dhaf_2231 YP_002458700.1 transcriptional regulator BAC0638 Protein 6e-39 44
Dhaf_2231 YP_002458700.1 transcriptional regulator BAC0111 Protein 3e-42 44
Dhaf_2231 YP_002458700.1 transcriptional regulator DQ212986.1.gene4.p01 Protein 3e-35 43
Dhaf_2231 YP_002458700.1 transcriptional regulator AF155139.2.orf0.gene Protein 1e-36 43
Dhaf_2231 YP_002458700.1 transcriptional regulator AE000516.2.gene3505. Protein 3e-31 43
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_014475.1.orf0.gen Protein 1e-37 42
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_005054.2598277.p0 Protein 1e-37 42
Dhaf_2231 YP_002458700.1 transcriptional regulator BAC0083 Protein 5e-45 42
Dhaf_2231 YP_002458700.1 transcriptional regulator NC_012469.1.7686381. Protein 1e-40 41
Dhaf_2231 YP_002458700.1 transcriptional regulator FJ349556.1.orf0.gene Protein 2e-35 41
Dhaf_2231 YP_002458700.1 transcriptional regulator BAC0347 Protein 1e-38 41
Dhaf_2231 YP_002458700.1 transcriptional regulator HE999704.1.gene2815. Protein 1e-38 41
Dhaf_2231 YP_002458700.1 transcriptional regulator U82965.2.orf14.gene. Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dhaf_2231 YP_002458700.1 transcriptional regulator VFG0596 Protein 3e-48 48
Dhaf_2231 YP_002458700.1 transcriptional regulator VFG1389 Protein 4e-40 47
Dhaf_2231 YP_002458700.1 transcriptional regulator VFG1390 Protein 8e-46 45
Dhaf_2231 YP_002458700.1 transcriptional regulator VFG1386 Protein 6e-41 41