|
Name : Dhaf_2127 (Dhaf_2127) Accession : YP_002458599.1 Strain : Desulfitobacterium hafniense DCB-2 Genome accession: NC_011830 Putative virulence/resistance : Resistance Product : ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 2293629 - 2295422 bp Length : 1794 bp Strand : + Note : PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: ATPase AAA; KEGG: amt:Amet_3808 ABC transporter related DNA sequence : ATGTCTGATTCAACAAACAAAAAAACCGGCGATATCCGCTGGTTATTGCAGCTGGCTGAAACAAAGAAAGCCAACTTGCT CCTGGCCTGTTTGCTTTCCGTCTTCAGTGCGGCGCTGTCCTTTGCACCGTATGTTTGCGTGTATTTTATTCTTAGAGTCA TCCTGGAAAACAGCGGAAACCTTGCAGGAATATCCTTCAGCTCCGTGGGCATTTACGCCTGGGTGGCACTGGGAACAGTC ATCCTGGGACTTTTGTTTTCTTTCCTTTCGTCGGTTCTTTCCCATGGAGCCGCCTATAAAATCCTGTTTGAGCTGCGTAT GAAATTTGCAGGGCACATTTCCCAGCTGCCCATGGGCTTTCATACCAGCAATTCGACGGGAAAGCTGCGTAAGCTGATGG ATGAAAATGTGGAGAAGCTCGAACTCTTTATCGCCCACCAGCTCCCGGATGCAGTGGGTTCCTTAGCTTCTCCGGTCGTA ATGCTGGTCGTATTATTCCTGTTCGACTGGAGAATGGGGCTGGCCTGCCTTGTACCCATCGTGCTGAGCTTTATGGCCCA GGCCGGCAGCTTAGCCAACCCCGAATCAAAAGAATTTATGGAGAGCTTCCAGGATTTGCAGGATAAAATGAACAGCTCGG CTGTGGAATATGTGCGGGGAATTTATGTGGTCAAGGCCTTCAATCAAACGGTGTTTTCTTTCCGCAAATTCCACGATACC ATCCTGGCCTATAAGGACAGCGCCATCCGCTATACCCACTCGGTAAAAAACTCCTATTGCGCTTTCCTCGTCCTGCTCAA TTCGGTGTTTCTGTTTCTGCTGCCGGTAGGAATCCTGATTGGCAGCCGCGCCGCCGATTACCAGGCCTTTGCCATAGCTT TCCTGTTCTACCTGATTTTCAGCATGGGCATTGCCGGGCCGGTGTCAAAGCTGATGTATGTGTTCGTGCAGGGTTTTATG GTATCGTCGAGCATCAAGCGGGTGCGGGGCGTATTTGATACGCCGGTACTCAGCGTTGGGGTGAATCGGGAAAAACCCCG GGGGAACGGCATTTCCTTTGAGCATGTTTTCTTCTCCTATAACAAAGACGATGCAAAGGGGACCCTCCATGATATCAGCT TCACGGCGGAGCCGGGGCAGGTGACGGCGCTGGTGGGGCCTTCGGGCAGCGGAAAAAGCACCATTGCTCAGCTTATCCCC CGGTTTTGGGATATTGACAGCGGCCAAATCGCTATAGGCGGCGTCAATATCACCGATATAGCCCTTGACGACCTGATGCA ATCGGTCAGCTTTGTTTTTCAGGACGTCTTCCTTTTCCAGAAAAGTATTCTGGAAAACATTAAGATCGGCAATGAAACCG CCAGCGATGAGGATGCTGTGTGGGCGGCAAAGGCCGCCATGTGCCACGAATTTATCGAGCGCCTGCCGGATGGATACCAT TCCGTATTGGGCAGCAAAGGCACTTACCTTTCGGGCGGGGAGCGCCAGCGCGTCGTCATCGCGCGGGCTATTTTGAAGAA TGCTCCCATTGTCATACTGGATGAAGCCACCGCCTTTGCTGACCCGGAAAATGAACAGAAAATCCAGCTGGCTCTGGAAA AGCTGATGAAGCATAAAACCGTCATTGTCATCGCTCACCGCCTGTCCACCATCAAAAACGCCGATAAGATCATCGTCGTG GACGAGGGGCGGATCGCCGAACAAGGCACCCATGAGGAACTGATCCGATATGGCGCCAAGTACGGGCACATGTGGGACGT TTACAGCAAAGCCCTTAACTGGAAGCTGGCCTAA Protein sequence : MSDSTNKKTGDIRWLLQLAETKKANLLLACLLSVFSAALSFAPYVCVYFILRVILENSGNLAGISFSSVGIYAWVALGTV ILGLLFSFLSSVLSHGAAYKILFELRMKFAGHISQLPMGFHTSNSTGKLRKLMDENVEKLELFIAHQLPDAVGSLASPVV MLVVLFLFDWRMGLACLVPIVLSFMAQAGSLANPESKEFMESFQDLQDKMNSSAVEYVRGIYVVKAFNQTVFSFRKFHDT ILAYKDSAIRYTHSVKNSYCAFLVLLNSVFLFLLPVGILIGSRAADYQAFAIAFLFYLIFSMGIAGPVSKLMYVFVQGFM VSSSIKRVRGVFDTPVLSVGVNREKPRGNGISFEHVFFSYNKDDAKGTLHDISFTAEPGQVTALVGPSGSGKSTIAQLIP RFWDIDSGQIAIGGVNITDIALDDLMQSVSFVFQDVFLFQKSILENIKIGNETASDEDAVWAAKAAMCHEFIERLPDGYH SVLGSKGTYLSGGERQRVVIARAILKNAPIVILDEATAFADPENEQKIQLALEKLMKHKTVIVIAHRLSTIKNADKIIVV DEGRIAEQGTHEELIRYGAKYGHMWDVYSKALNWKLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-124 | 47 |
