Gene Information

Name : Dhaf_2117 (Dhaf_2117)
Accession : YP_002458589.1
Strain : Desulfitobacterium hafniense DCB-2
Genome accession: NC_011830
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2284970 - 2285704 bp
Length : 735 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gtn:GTNG_0853 ABC transporter ATP-binding protein

DNA sequence :
ATGGAGCAACCGCATTGCATTGTTTTGCGTAAGGTCAATAAATTCTTTGGCAAAAAGCATGTCCTCAAAGAGATTGACCT
GGAAATTCCCTATGGCCATATCTACGGCTTGCTGGGCCCTTCCGGCTGCGGCAAAACCACCATCGTGAAAATAATTGCAG
GGATACTGGAAGCTACTTCCGGCGAAGCCTATGTCCTCGGTGAAAGGATGCCCCGGCTGAGCTTAATGAACAAGGTAGGG
TATATGGCTCAGTCCGATGCTCTCTATGGTACCTTAACCGCAGCGGAAAATCTGCAGTTTTTTGGGGCCATTTATGGCAT
GGGCAAGGGAGAGATCAAAAAACGGACGGCGGAAGTCATGGAGTTGGTCAATCTTACCGAACACCTCCACAAACCGGTCC
AGGCTTTTTCCGGCGGAATGAAACGGCGGCTTTCCCTGGCTATGGCTGTTATGCACAACCCGCCGGTGCTGGTTTTGGAT
GAACCTACGGTAGGGATCGACCCACTTTTAAGGAGAACGATCTGGGCGGAATTAAACACCTTGGCCAGGCAAGGGATTAC
GATCCTGGTCACAACCCATGTCATGGATGAAGCGGATAAATGCCACAGCCTTGCTATGATGCGGGATGGACGCCTGATCG
CTAAGGGCACTTCCCGGGAGCTGCAGGATAGGATCGGTGTCAACGACATCGAAGAAGCTTTCATCTATTATGGAGGACAA
CAGGATGAGAGTTAG

Protein sequence :
MEQPHCIVLRKVNKFFGKKHVLKEIDLEIPYGHIYGLLGPSGCGKTTIVKIIAGILEATSGEAYVLGERMPRLSLMNKVG
YMAQSDALYGTLTAAENLQFFGAIYGMGKGEIKKRTAEVMELVNLTEHLHKPVQAFSGGMKRRLSLAMAVMHNPPVLVLD
EPTVGIDPLLRRTIWAELNTLARQGITILVTTHVMDEADKCHSLAMMRDGRLIAKGTSRELQDRIGVNDIEEAFIYYGGQ
QDES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0081 YP_251996.1 hypothetical protein Not tested SCCmec Protein 3e-42 49
SH2613 YP_254528.1 hypothetical protein Not tested ¥ðSh2 Protein 3e-52 48
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 6e-54 48